fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016735 not found in 191aa AT3G55770.5 1st_not 0.623471882 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G10200.1     MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
pp016735_Pp1s80 MAFSGTTQKCKACEKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKP
                ***:****** **:******::****. ****:****:********:** *:******:*

AT1G10200.1     HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI
pp016735_Pp1s80 HFEQLLKVTGSFDKSFEHKPSEGL-KKAEKGENKAPSKASLMFSGTQEKCIACSKTVYPI
                **:* :* ***::**** .*. *  .:. :**. * :*.* **.**:***:.*.******

AT1G10200.1     EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE
pp016735_Pp1s80 EKTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQL----T
                **.:*:*  ***.****.*********** * **:**** *: **:***** ***     

AT1G10200.1     NAAKDKVVAA------
pp016735_Pp1s80 KAPALKVAASQAITES
                :*.  **.*:
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P
pp016735_Pp1s80    M A F S G T T Q K C K A C E K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A N Y A S L E G V L Y C K P
 
AT1G10200.1     H F D Q N F K R T G S L E K S F E G T P K I G K P D R P L E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y P I
pp016735_Pp1s80    H F E Q L L K V T G S F D K S F E H K P S E G L - K K A E K G E N K A P S K A S L M F S G T Q E K C I A C S K T V Y P I
 
AT1G10200.1     E K V S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L E G G G E
pp016735_Pp1s80    E K T T V E G L P Y H K Q C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L - - - - T
 
AT1G10200.1     N A A K D K V V A A - - - - - -
pp016735_Pp1s80    K A P A L K V A A S Q A I T E S
 
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