fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000231 not found in 191aa AT3G55770.5 not_not 0.613691931 III
Pp021241 not found in 215aa AT3G55770.5 not_not 0.555012224 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G10200.1     MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
pp021241_Pp1s65 MALVVAQPKCKTCDKTVYLVDQLRADGVLYHKACFRCHHCKGTLKLGNYASLEGVLYCRP
pp000231_Pp1s13 MAFSGTQQKCKACDKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLASYASLEGVLYCKP
                **:  :  ** :********::* **. :***:****:********..* *:******:*

AT1G10200.1     HFDQNFKRTGSLEKSFEGTPK-IGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYP
pp021241_Pp1s65 HFDQLLKTTGSFEKSFDQQASMKGQSGYERFQNK-TPSKGSTQFVGTQEKCVACGKTVYP
pp000231_Pp1s13 HFEQLLKLTGSFDKSFEHKPS-EGLKKLPEKGEK-VPSKASLMFSGTQDKCIACSKTVYP
                **:* :* ***::***:  ..  *        :: . :* *  * **::**:.*.*****

AT1G10200.1     IEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL----
pp021241_Pp1s65 LEKTTVEDLPYHKSCFKCAHGSCTISVSSYASLEGRLYCKHHYSQLFKEKGNYSRLTKPP
pp000231_Pp1s13 IDKTTVEGLPYHKHCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKVP
                ::*.:*:.  *** ****.**.**** *.* : **:**** *: **:***** *:*    

AT1G10200.1     --------EGG-----GENAAKDKVVAA--------
pp021241_Pp1s65 AMKPTTKNEGGRMSLHFESKQSQEQVGRYTADTIDQ
pp000231_Pp1s13 ALKVAATNAS------VES-----------------
                         .       *.
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P
pp021241_Pp1s65    M A L V V A Q P K C K T C D K T V Y L V D Q L R A D G V L Y H K A C F R C H H C K G T L K L G N Y A S L E G V L Y C R P
pp000231_Pp1s13    M A F S G T Q Q K C K A C D K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A S Y A S L E G V L Y C K P
 
AT1G10200.1     H F D Q N F K R T G S L E K S F E G T P K - I G K P D R P L E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y P
pp021241_Pp1s65    H F D Q L L K T T G S F E K S F D Q Q A S M K G Q S G Y E R F Q N K - T P S K G S T Q F V G T Q E K C V A C G K T V Y P
pp000231_Pp1s13    H F E Q L L K L T G S F D K S F E H K P S - E G L K K L P E K G E K - V P S K A S L M F S G T Q D K C I A C S K T V Y P
 
AT1G10200.1     I E K V S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L - - - -
pp021241_Pp1s65    L E K T T V E D L P Y H K S C F K C A H G S C T I S V S S Y A S L E G R L Y C K H H Y S Q L F K E K G N Y S R L T K P P
pp000231_Pp1s13    I D K T T V E G L P Y H K H C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K V P
 
AT1G10200.1     - - - - - - - - E G G - - - - - G E N A A K D K V V A A - - - - - - - -
pp021241_Pp1s65    A M K P T T K N E G G R M S L H F E S K Q S Q E Q V G R Y T A D T I D Q
pp000231_Pp1s13    A L K V A A T N A S - - - - - - V E S - - - - - - - - - - - - - - - - -
 
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