fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016092 not found in 197aa AT1G10200.1 1st_1st 0.836185819 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G10200.1     MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
pt016092_POPTR_ MAFAGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
                ****************************.*****************.*************

AT1G10200.1     HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI
pt016092_POPTR_ HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDGEKPVSTKVSTMFAGTREKCFGCKNTVYPT
                **** *******:********* **::*::**:*..****.**.******.**.:**** 

AT1G10200.1     EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE
pt016092_POPTR_ EKVSVNGTPYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIE
                ******** ******** ****************:******* **************. *

AT1G10200.1     -----NAAKDKVVAA--
pt016092_POPTR_ KDSMNNKTNGREVAAES
                     * ::.: ***
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P
pt016092_POPTR_    M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R A Y H K A C F R C H H C K G T L K L G N Y N S F E G V L Y C R P
 
AT1G10200.1     H F D Q N F K R T G S L E K S F E G T P K I G K P D R P L E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y P I
pt016092_POPTR_    H F D Q L F K R T G S L D K S F E G T P K I V K P E K P V D G E K P V S T K V S T M F A G T R E K C F G C K N T V Y P T
 
AT1G10200.1     E K V S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L E G G G E
pt016092_POPTR_    E K V S V N G T P Y H K S C F K C I H G G C T I S P S N Y I A H E G R L Y C K H H H N Q L I K E K G N L S Q L E G D I E
 
AT1G10200.1     - - - - - N A A K D K V V A A - -
pt016092_POPTR_    K D S M N N K T N G R E V A A E S
 
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