fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021836 not found in 376aa AT2G39900.1 not_not 0.518337408 III
Sb011141 not found in 200aa AT3G61230.1 not_not 0.511002444 III
Sb014339 not found in 203aa AT3G61230.1 not_not 0.488997555 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G10200.1     -------------------------------------------------------MAFAG
Sb011141_Sorbi1 -------------------------------------------------------MSFTG
Sb021836_Sorbi1 ARQSGRRARRCSFLIHPTPRARRPRPDRALSQISPGGHDPRERERERGGLAGDREKMFSG
Sb014339_Sorbi1 -------------------------------------------------------MSFTG
                                                                         *:*

AT1G10200.1     TTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQN
Sb011141_Sorbi1 TQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSISSYSSMDGVLYCKTHFEQL
Sb021836_Sorbi1 TQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHFEQL
Sb014339_Sorbi1 TQDKCTACDKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQL
                * :** .* ***: :* *::*.  :*::**:* ***. *.:..*.*::** **:.**:* 

AT1G10200.1     FKRTGSLEKSFEGTPKIGKPDRPL--EGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKV
Sb011141_Sorbi1 FKETGTFSKKFQGGASSTKT------DQAK-APSKLSSAFSGTQDKCAACQKTVYPLEKM
Sb021836_Sorbi1 FKETGSYNKSFQSQSPAKITPEKLAPELTR-SPSKAARMFSGTQDKCATCGKTAYPLEKV
Sb014339_Sorbi1 FKETGSFSKKFTPGCKSDKG------ELAR-APSKLSSAFSGTQDKCAACQKTVYPLEKL
                **.**: .*.*               :  : : :* :  *.**::**. * **.**:**:

AT1G10200.1     SVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL--------
Sb011141_Sorbi1 TLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTKK
Sb021836_Sorbi1 TVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASVKR
Sb014339_Sorbi1 TLEGEAYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSTSQE
                :::   ********:**** ::.*.* * :* **** *. **: ***. .::        

AT1G10200.1     ----EGGGENAAKDKVVAA------
Sb011141_Sorbi1 NEAAEAAPEAPADAGAAEPEAA---
Sb021836_Sorbi1 --AAEAQPEQPASDSS---------
Sb014339_Sorbi1 VLPDLAAEEQPPQPAAPEDEKGEDN
                     .  * ...
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A F A G
Sb011141_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
Sb021836_Sorbi1    A R Q S G R R A R R C S F L I H P T P R A R R P R P D R A L S Q I S P G G H D P R E R E R E R G G L A G D R E K M F S G
Sb014339_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
 
AT1G10200.1     T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P H F D Q N
Sb011141_Sorbi1    T Q D K C K T C D K T V H F I D L L T A D G V S Y H K T C F K C S H C K G T L S I S S Y S S M D G V L Y C K T H F E Q L
Sb021836_Sorbi1    T Q Q K C K V C T K T V Y P M D Q L S T D G V A F H R S C F K C Q H C K S T L S L S N Y S S F E G V P Y C K A H F E Q L
Sb014339_Sorbi1    T Q D K C T A C D K T V H F I D L L T A D G V I Y H K T C F K C S H C K G I L S M C S Y S S M D G V L Y C K T H F E Q L
 
AT1G10200.1     F K R T G S L E K S F E G T P K I G K P D R P L - - E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y P I E K V
Sb011141_Sorbi1    F K E T G T F S K K F Q G G A S S T K T - - - - - - D Q A K - A P S K L S S A F S G T Q D K C A A C Q K T V Y P L E K M
Sb021836_Sorbi1    F K E T G S Y N K S F Q S Q S P A K I T P E K L A P E L T R - S P S K A A R M F S G T Q D K C A T C G K T A Y P L E K V
Sb014339_Sorbi1    F K E T G S F S K K F T P G C K S D K G - - - - - - E L A R - A P S K L S S A F S G T Q D K C A A C Q K T V Y P L E K L
 
AT1G10200.1     S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L - - - - - - - -
Sb011141_Sorbi1    T L E G E S Y H K S C F K C S H G G C I L T T S S Y A A L N G I L Y C K I H F S Q L F K E K G S Y N H L I Q T A Q T K K
Sb021836_Sorbi1    T V E E K A Y H K S C F K C S H G G C A I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V K R
Sb014339_Sorbi1    T L E G E A Y H K S C F K C S H G G C I L T T S S Y A A L N G V L Y C K I H F G Q L F M E K G S Y N H M K K K S T S Q E
 
AT1G10200.1     - - - - E G G G E N A A K D K V V A A - - - - - -
Sb011141_Sorbi1    N E A A E A A P E A P A D A G A A E P E A A - - -
Sb021836_Sorbi1    - - A A E A Q P E Q P A S D S S - - - - - - - - -
Sb014339_Sorbi1    V L P D L A A E E Q P P Q P A A P E D E K G E D N
 
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