fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031673 not found in 245aa AT1G10200.1 1st_1st 0.782396088 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G10200.1     --MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYC
Sb031673_Sorbi1 MATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYC
                   :* *** ** *****************:*****************:***********

AT1G10200.1     RPHFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVY
Sb031673_Sorbi1 RPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNEN--AVKVSSAFAGTREKCVGCSKTVY
                ****** *******:********: **:* : .*.  ..***. *.*********.****

AT1G10200.1     PIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGG
Sb031673_Sorbi1 PIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
                ***:*:**.*:******** *********************************:****..

AT1G10200.1     GENAAKDKVVAA----
Sb031673_Sorbi1 HEKTSQAGSLEDEEEY
                 *::::   :
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     - - M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C
Sb031673_Sorbi1    M A T S F Q G T T T K C T A C D K T V Y L V D K L T A D N R I Y H K A C F R C H H C K G T L K L A N Y N S F E G V L Y C
 
AT1G10200.1     R P H F D Q N F K R T G S L E K S F E G T P K I G K P D R P L E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y
Sb031673_Sorbi1    R P H F D Q L F K R T G S L D K S F E G T P K V V K P E R N V G N E N - - A V K V S S A F A G T R E K C V G C S K T V Y
 
AT1G10200.1     P I E K V S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L E G G
Sb031673_Sorbi1    P I E R V T V N N T M Y H K S C F K C C H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N F S Q L E N D
 
AT1G10200.1     G E N A A K D K V V A A - - - -
Sb031673_Sorbi1    H E K T S Q A G S L E D E E E Y
 
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