fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014099 not found in 196aa AT1G10200.1 1st_1st 0.848410757 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G10200.1     MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
gm014099_Glyma0 MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
                ************************************************************

AT1G10200.1     HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI
gm014099_Glyma0 HFDQLFKRTGSLDKSFEGTPKIAKPEKTGE-EKPAATKVSSMFGGTRDKCAGCQKTVYPT
                **** *******:*********.**::. * *:**.****.******:**.**:***** 

AT1G10200.1     EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE
gm014099_Glyma0 EKVTVNGTPYHKSCFKCTHGGCVISPSNYIAHEGKLYCKHHHVQLIKEKGNLSQLEGDHE
                ***:**** *************.*******************:**************. *

AT1G10200.1     NAAKD-----KVVAA--
gm014099_Glyma0 KSAEQEKINGEVVAAET
                ::*::     :****
BoxShade v3.31 C (beta, 970507) Output
AT1G10200.1     M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P
gm014099_Glyma0    M A F A G T T Q K C M A C D K T V Y L V D K L T A D N R V Y H K A C F R C H H C K G T L K L S N Y N S F E G V L Y C R P
 
AT1G10200.1     H F D Q N F K R T G S L E K S F E G T P K I G K P D R P L E G E R P A G T K V S N M F G G T R E K C V G C D K T V Y P I
gm014099_Glyma0    H F D Q L F K R T G S L D K S F E G T P K I A K P E K T G E - E K P A A T K V S S M F G G T R D K C A G C Q K T V Y P T
 
AT1G10200.1     E K V S V N G T L Y H K S C F K C T H G G C T I S P S N Y I A H E G K L Y C K H H H I Q L I K E K G N L S Q L E G G G E
gm014099_Glyma0    E K V T V N G T P Y H K S C F K C T H G G C V I S P S N Y I A H E G K L Y C K H H H V Q L I K E K G N L S Q L E G D H E
 
AT1G10200.1     N A A K D - - - - - K V V A A - -
gm014099_Glyma0    K S A E Q E K I N G E V V A A E T
 
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