fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G10610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042458 not found in 486aa AT1G10610.1 1st_1st 0.313358302 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G10610.1     MMMMRGGERVKEFLRPFVDSRTWDLCVIWKLGDDPSRFIEWVGCCC----SGCYIDKNIK
pt042458_POPTR_ ---MRGLDRAMERLRPLVDSNAWDYCVVWKLGDDPSRFIEWVGCCCGGGGGGGY---NVE
                   *** :*. * ***:***.:** **:******************    .* *   *::

AT1G10610.1     LENSEEGGTGRKKKASFCRDDHNKHRIRTLACEALSRFPLFMPLYPGIHGEVVMSKSPKW
pt042458_POPTR_ RDRGEDNQFGR---GPLCKDVYFKHPVRTKACEALSRFPSSMPLYSGIHGEVVISAEPRW
                 :..*:.  **   ..:*:* : ** :** *********  ****.*******:* .*:*

AT1G10610.1     LV-------NSGSKMEMFSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMSRC-------
pt042458_POPTR_ LCHATVTTHDSNTLREVAGTQVLIPVIGGLVELFAAKHMKKDEKMIESIRAHCHVPVKQE
                *        :*.:  *: .*:**:** .******* .    **.*:. * ::*       

AT1G10610.1     ------------------TTFFEPFPEQRLQFRIIPRAE--ESMSSGVNLSVEGGGSSSV
pt042458_POPTR_ AVTELGYSNSSFNDHRLDSLLEENLPHSCHLLSLIPRTQFLLPLSQPRN-SISFEGSSSG
                                  : : * :*..   : :***::   .:*.  * *:.  **** 

AT1G10610.1     SNPSSETQNLFGN---YPNASCVEILREEQTPCLIMNKEKDVVVQNANDSKANKKLLPT-
pt042458_POPTR_ SNPSNEAPSFVSNASQLPQHGHLELSVGKS------NHDEKILKQRAGSADCNKK-VPKV
                ****.*: .:..*    *: . :*:   :.      *:::.:: *.*..:..*** :*. 

AT1G10610.1     ------ENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVE
pt042458_POPTR_ MRRSERDDYKSKNLVTERNRRTRIKTGLFALRALVPKISKMDKAAILGDAIDYVGELLKE
                      :::***** :**:** **: .::.***:****:*::* .*:.**:**:.*** *

AT1G10610.1     KQKLEDELKGINEMECK-----------EIAAEEQSAIADPEAERVSSKSNKRVKKN--E
pt042458_POPTR_ VKNLQDEIKNAEEEERRASNIELKTSKLEIFQEDHVS-----SSKINQDSSGFVEKKGAE
                 ::*:**:*. :* * :           **  *:: :     :.::...*.  *:*:  *

AT1G10610.1     VKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIIDVNFTRLDLTVMTVLNVKA
pt042458_POPTR_ VQLEVDQISKRQFLLKFLCEQRQGGFGRLMETIHSLGLQILDANITTFNGNVLNILKVEA
                *::**.: .:*:**::.: *::*.** **:*::.   *:*:*.*:* :: .*:.:*:*:*

AT1G10610.1     NKDGIACGILRDLLLKM---MITSI----
pt042458_POPTR_ DKD-IHPKTLKKSLIELTGNLIQTFGSQI
                :** *    *:. *:::   :* ::
BoxShade v3.31 C (beta, 970507) Output
AT1G10610.1     M M M M R G G E R V K E F L R P F V D S R T W D L C V I W K L G D D P S R F I E W V G C C C - - - - S G C Y I D K N I K
pt042458_POPTR_    - - - M R G L D R A M E R L R P L V D S N A W D Y C V V W K L G D D P S R F I E W V G C C C G G G G G G G Y - - - N V E
 
AT1G10610.1     L E N S E E G G T G R K K K A S F C R D D H N K H R I R T L A C E A L S R F P L F M P L Y P G I H G E V V M S K S P K W
pt042458_POPTR_    R D R G E D N Q F G R - - - G P L C K D V Y F K H P V R T K A C E A L S R F P S S M P L Y S G I H G E V V I S A E P R W
 
AT1G10610.1     L V - - - - - - - N S G S K M E M F S T R V L V P V S D G L V E L F A F D M R P F D E S M V H L I M S R C - - - - - - -
pt042458_POPTR_    L C H A T V T T H D S N T L R E V A G T Q V L I P V I G G L V E L F A A K H M K K D E K M I E S I R A H C H V P V K Q E
 
AT1G10610.1     - - - - - - - - - - - - - - - - - - T T F F E P F P E Q R L Q F R I I P R A E - - E S M S S G V N L S V E G G G S S S V
pt042458_POPTR_    A V T E L G Y S N S S F N D H R L D S L L E E N L P H S C H L L S L I P R T Q F L L P L S Q P R N - S I S F E G S S S G
 
AT1G10610.1     S N P S S E T Q N L F G N - - - Y P N A S C V E I L R E E Q T P C L I M N K E K D V V V Q N A N D S K A N K K L L P T -
pt042458_POPTR_    S N P S N E A P S F V S N A S Q L P Q H G H L E L S V G K S - - - - - - N H D E K I L K Q R A G S A D C N K K - V P K V
 
AT1G10610.1     - - - - - - E N F K S K N L H S E R K R R E R I N Q A M Y G L R A V V P K I T K L N K I G I F S D A V D Y I N E L L V E
pt042458_POPTR_    M R R S E R D D Y K S K N L V T E R N R R T R I K T G L F A L R A L V P K I S K M D K A A I L G D A I D Y V G E L L K E
 
AT1G10610.1     K Q K L E D E L K G I N E M E C K - - - - - - - - - - - E I A A E E Q S A I A D P E A E R V S S K S N K R V K K N - - E
pt042458_POPTR_    V K N L Q D E I K N A E E E E R R A S N I E L K T S K L E I F Q E D H V S - - - - - S S K I N Q D S S G F V E K K G A E
 
AT1G10610.1     V K I E V H E T G E R D F L I R V V Q E H K Q D G F K R L I E A V D L C E L E I I D V N F T R L D L T V M T V L N V K A
pt042458_POPTR_    V Q L E V D Q I S K R Q F L L K F L C E Q R Q G G F G R L M E T I H S L G L Q I L D A N I T T F N G N V L N I L K V E A
 
AT1G10610.1     N K D G I A C G I L R D L L L K M - - - M I T S I - - - -
pt042458_POPTR_    D K D - I H P K T L K K S L I E L T G N L I Q T F G S Q I
 
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