fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030146 not found in 344aa AT2G18060.1 not_not 0.406329113 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12260.1     MNSF-SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIG
gm030146_Glyma1 MESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIG
                *:*: * ***************.*********::*::*.*::****:******** *:**

AT1G12260.1     HEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGR
gm030146_Glyma1 YEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKGR
                :***.:********************* ************:* * .**************

AT1G12260.1     APNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQL
gm030146_Glyma1 APNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWESSYFYDEA
                *****************:****.**********.***: :.  :  : :.  * :: *: 

AT1G12260.1     SFMASELETNGQRRILPNH---HQQQQHEHQQHMPYGLNASAYALNNPNLQCKQELE---
gm030146_Glyma1 SGATSTL-------VDPIELISRQSQSFLAQ-----------------NFMCKQELEADN
                *  :* *       : * .   :*.*..  *                 *: ******   

AT1G12260.1     ---LHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPY----GTSNI--DNN
gm030146_Glyma1 LTCMHQD--------------PFVQLPQLESP----------SLPLVKKPSTVSLVSDNN
                   :* :              .*:********          ***     .* .:  ***

AT1G12260.1     SSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNE--
gm030146_Glyma1 ------------------NEGEDNQNRLLFNNNNTKKV--TTDWRALDKFVASQLSQEVN
                                  *:*::* . * :*..* : :  .****.**********:*  

AT1G12260.1     ----EAATASASIQNNAKDTSNAEYQVDEEKDP-KRASDMGEEYTASTSSSCQIDLWK
gm030146_Glyma1 THETNVGVLSSSFEPHDDNHDMALLLLQSSRDEGNRLSPF-----LNTSSDCDNGIC-
                    :... *:*:: : .: . *   ::..:*  :* * :      .***.*: .:
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     M N S F - S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q E L C K I G
gm030146_Glyma1    M E S M E S C V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R E I D L Y R I E P W D L Q E R C R I G
 
AT1G12260.1     H E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L R H S L I G M R K T L V F Y K G R
gm030146_Glyma1    Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y E R A K L I G M R K T L V F Y K G R
 
AT1G12260.1     A P N G Q K S D W I M H E Y R L E T D E N G T P Q E E G W V V C R V F K K R L A A V R R M G D Y D S S P S H W Y D D Q L
gm030146_Glyma1    A P N G Q K S D W I M H E Y R L E S D E N G P P Q E E G W V V C R A F K K K T T G Q T K T I N I E G W E S S Y F Y D E A
 
AT1G12260.1     S F M A S E L E T N G Q R R I L P N H - - - H Q Q Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C K Q E L E - - -
gm030146_Glyma1    S G A T S T L - - - - - - - V D P I E L I S R Q S Q S F L A Q - - - - - - - - - - - - - - - - - N F M C K Q E L E A D N
 
AT1G12260.1     - - - L H Y N H L V Q R N H L L D E S H L S F L Q L P Q L E S P K I Q Q D N S N C N S L P Y - - - - G T S N I - - D N N
gm030146_Glyma1    L T C M H Q D - - - - - - - - - - - - - - P F V Q L P Q L E S P - - - - - - - - - - S L P L V K K P S T V S L V S D N N
 
AT1G12260.1     S S H N A N L Q Q S N I A H E E Q L N Q G N Q N F S S L Y M N S G N E Q V M D Q V T D W R V L D K F V A S Q L S N E - -
gm030146_Glyma1    - - - - - - - - - - - - - - - - - - N E G E D N Q N R L L F N N N N T K K V - - T T D W R A L D K F V A S Q L S Q E V N
 
AT1G12260.1     - - - - E A A T A S A S I Q N N A K D T S N A E Y Q V D E E K D P - K R A S D M G E E Y T A S T S S S C Q I D L W K
gm030146_Glyma1    T H E T N V G V L S S S F E P H D D N H D M A L L L L Q S S R D E G N R L S P F - - - - - L N T S S D C D N G I C -
 
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