fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp015611 not found in 373aa AT1G12260.1 1st_1st 0.286075949 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12260.1     MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEID-FIKDIDLYKIEPWDLQELCKIG
pp015611_Pp1s18 MNNKAPIPVGFRFHPTDEELVGYYLHGKVG--RFQRDQLIQELDLYKIEPWDLHEVCRIG
                **. : :* ************.***: **.  *:: * :*:::**********:*:*:**

AT1G12260.1     H---EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFY
pp015611_Pp1s18 DDAPEHQSDWYFFSHKDKKYPTGNRANRATTAGFWKATGRDKPIHTQRQVIGMRKTLVFY
                .   *.*****************.*:****.***********.*: ::.:**********

AT1G12260.1     KGRAPNGQKSDWIMHEYRLETDENGTP--QEEGWVVCRVFKKRLAAVRRMGDYDS----S
pp015611_Pp1s18 KGRAPNGQKTDWIMHEFRLDDCPGASPNYESDGWVVCRVF-------RKMKNFKTKSQET
                *********:******:**:   ..:*  :.:********       *:* ::.:    :

AT1G12260.1     PSHWYDDQLSFMASELETNGQRRILPNHH--QQQQHEHQQHMPYGLNASAYALNNPNLQC
pp015611_Pp1s18 SCSLEEDQV--LLPELMSHSEGGGGPSSQGGEVQYNPHLHHFSF--------------TC
                ..   :**:  : .** ::.:    *. :  : * : * :*:.:               *

AT1G12260.1     KQELE----------------LHYNHL-------VQRNHLLDESHLSFLQL-PQLESPKI
pp015611_Pp1s18 KQELSVEDYRTPISSDPFMENLHLHELHRSIEPSCHQNYLPPSVSSTFRSLQPACTSGRS
                ****.                ** :.*        ::*:*  .   :* .* *   * : 

AT1G12260.1     QQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQ
pp015611_Pp1s18 SRDYAEYSLVPF---PLESTSLRDFDDARSSV------TQDGSSLTALAHHNDAEYWM--
                .:* :: . :*:    ::..* :: :  :*.:      .*....:::*  :.. *  *  

AT1G12260.1     VTDWRVLDKFVASQLSNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRASDMGEEYTAS
pp015611_Pp1s18 ------LDGGISKAGARRDQTLAAVT------------YHVDLKS--RQSSD---NSSAS
                      **  ::.  :..: : *:.:            *:** :.  :::**   : :**

AT1G12260.1     TSSSCQIDLWK-
pp015611_Pp1s18 TNHEGFGHLWNV
                *. .   .**:
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D - F I K D I D L Y K I E P W D L Q E L C K I G
pp015611_Pp1s18    M N N K A P I P V G F R F H P T D E E L V G Y Y L H G K V G - - R F Q R D Q L I Q E L D L Y K I E P W D L H E V C R I G
 
AT1G12260.1     H - - - E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L R H S L I G M R K T L V F Y
pp015611_Pp1s18    D D A P E H Q S D W Y F F S H K D K K Y P T G N R A N R A T T A G F W K A T G R D K P I H T Q R Q V I G M R K T L V F Y
 
AT1G12260.1     K G R A P N G Q K S D W I M H E Y R L E T D E N G T P - - Q E E G W V V C R V F K K R L A A V R R M G D Y D S - - - - S
pp015611_Pp1s18    K G R A P N G Q K T D W I M H E F R L D D C P G A S P N Y E S D G W V V C R V F - - - - - - - R K M K N F K T K S Q E T
 
AT1G12260.1     P S H W Y D D Q L S F M A S E L E T N G Q R R I L P N H H - - Q Q Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C
pp015611_Pp1s18    S C S L E E D Q V - - L L P E L M S H S E G G G G P S S Q G G E V Q Y N P H L H H F S F - - - - - - - - - - - - - - T C
 
AT1G12260.1     K Q E L E - - - - - - - - - - - - - - - - L H Y N H L - - - - - - - V Q R N H L L D E S H L S F L Q L - P Q L E S P K I
pp015611_Pp1s18    K Q E L S V E D Y R T P I S S D P F M E N L H L H E L H R S I E P S C H Q N Y L P P S V S S T F R S L Q P A C T S G R S
 
AT1G12260.1     Q Q D N S N C N S L P Y G T S N I D N N S S H N A N L Q Q S N I A H E E Q L N Q G N Q N F S S L Y M N S G N E Q V M D Q
pp015611_Pp1s18    S R D Y A E Y S L V P F - - - P L E S T S L R D F D D A R S S V - - - - - - T Q D G S S L T A L A H H N D A E Y W M - -
 
AT1G12260.1     V T D W R V L D K F V A S Q L S N E E A A T A S A S I Q N N A K D T S N A E Y Q V D E E K D P K R A S D M G E E Y T A S
pp015611_Pp1s18    - - - - - - L D G G I S K A G A R R D Q T L A A V T - - - - - - - - - - - - Y H V D L K S - - R Q S S D - - - N S S A S
 
AT1G12260.1     T S S S C Q I D L W K -
pp015611_Pp1s18    T N H E G F G H L W N V
 
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