Input
| Putative repression domain
|
|
AT1G12260.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt010221 |
not found in 356aa |
AT1G12260.1 |
not_1st |
0.572151898 |
II |
Pt023412 |
PCKKEIDLQYQIPHDHFL in 214/370 |
AT1G12260.1 |
not_1st |
0.506329113 |
II |
Pt027031 |
not found in 363aa |
AT1G12260.1 |
not_1st |
0.502531645 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G12260.1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH
pt023412_POPTR_ MNTFTHVPPGFRFHPTDEELVDYYLRKKVNSRRIDVDVIKDVDLYKIEPWDLQELCRIGT
pt027031_POPTR_ MNSFTHVPPGFRFHPTDEELVHYYLRKKVNSRRIDLDVIKDVELYKIEPWDLQELCRIGT
pt010221_POPTR_ MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT
**:*:****************.******* *:**::*.***::*************::*
AT1G12260.1 EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA
pt023412_POPTR_ EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKQDLIGMRKTLVFYKGRA
pt027031_POPTR_ EEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
pt010221_POPTR_ EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA
*:*.:********************* ************** ::.***************
AT1G12260.1 PNGQKSDWIMHEYRLETDENGTPQE--------EGWVVCRVFKKRLAAVRRMGDYDSSPS
pt023412_POPTR_ PNGQKSDWIMHEYRLETDENGTPQASIGRRFYEEGWVVCRVFKKRLPTMRKVSEHESVC-
pt027031_POPTR_ PNGQKSDWIMHEYRLETDENGTPQA--------KGWVVCRVFKKRIPTMPKVSEHESVC-
pt010221_POPTR_ PNGQKSDLIMHEYRLETNENGTPQA--------KGWVVCRVFKKKMPTMRKVSDYDSPC-
******* *********:****** :**********::.:: ::.:::*
AT1G12260.1 HWYDDQLSFMASELETNGQRRILPNHHQQQQHEHQQHMPYGLNASAYALNNPNLQCKQEL
pt023412_POPTR_ -WYDDQVAFM-HDLDS-------PKQNSQPDLGYQFPYP----------------CKKEI
pt027031_POPTR_ -WYDDQVAFM-HDLDS-------PKQNFQPDLGYQFPYS----------------CKKEL
pt010221_POPTR_ -WYDDQVSFM-PETDS-------PRRISQPYASYLHHYT----------------CKQEL
*****::** : :: *.: * : . **:*:
AT1G12260.1 ELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQD--NSNCNSL--PYGTSNIDNNSSHN
pt023412_POPTR_ DLQYQI----------PHDHFLQLPLLQSPKLLQPAPTISCNSINAAYGL-----DINQA
pt027031_POPTR_ DFQYQI----------PHDHFLQLPLLQSPKLLQSAPTLSCNSINAAYGL-----DINQT
pt010221_POPTR_ ELPYNM----------PHDPFLQLPQLESPKVPQSAATASCNSV-IAYAY-----DRTNG
:: *: .* ***** *:***: * . .***: .*. : .:
AT1G12260.1 ANLQQSNIAHEEQLNQGN-QNFSSLYMNSGN--EQVMDQVTDWRVLDKFVASQLSNEEAA
pt023412_POPTR_ STIQSSTLTQEDHIQQAHEQSFPSIYGSNNIN-EQAVDQVTDWRVLDKFVASQLSQEDVV
pt027031_POPTR_ STFQSSTLTQEDHVQQTHEQRFPTIYGNNNSNHEQAVDQVTDWRVLDKFVASQLSHEDVI
pt010221_POPTR_ STLQSSTLTQEEQMQQCHQQNLNSFYNNNNS--EQAVDQVTDWRVLDKFVASQLSHEDAS
:.:*.*.:::*::::* : * : ::* ... **.:******************:*:.
AT1G12260.1 T------ASASIQNNAKDTSNAEYQVDEEK--DPKRASDMGEEYTASTSSSCQIDLWK
pt023412_POPTR_ KENNHPNASNNIFNTS--SIHAPNIFARHL----SKQDTSVPENASTSTSSCQIDLWK
pt027031_POPTR_ KETNHPNASNNIFNTS--SVHAANILVRHL----NKQEASVQENASTSTSSCQIDLWK
pt010221_POPTR_ K------GTNNYSNKA--TFHAAEQM--HMLANDSKRSETAQEYASTSTSSCQIDLWK
. .: . *.: : :* . . .: . * :::::*********
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1 |
M |
N |
S |
F |
S |
H |
V |
P |
P |
G |
F |
R |
F |
H |
P |
T |
D |
E |
E |
L |
V |
D |
Y |
Y |
L |
R |
K |
K |
V |
A |
S |
K |
R |
I |
E |
I |
D |
F |
I |
K |
D |
I |
D |
L |
Y |
K |
I |
E |
P |
W |
D |
L |
Q |
E |
L |
C |
K |
I |
G |
H |
pt023412_POPTR_ |
M |
N |
T |
F |
T |
H |
V |
P |
P |
G |
F |
R |
F |
H |
P |
T |
D |
E |
E |
L |
V |
D |
Y |
Y |
L |
R |
K |
K |
V |
N |
S |
R |
R |
I |
D |
V |
D |
V |
I |
K |
D |
V |
D |
L |
Y |
K |
I |
E |
P |
W |
D |
L |
Q |
E |
L |
C |
R |
I |
G |
T |
pt027031_POPTR_ |
M |
N |
S |
F |
T |
H |
V |
P |
P |
G |
F |
R |
F |
H |
P |
T |
D |
E |
E |
L |
V |
H |
Y |
Y |
L |
R |
K |
K |
V |
N |
S |
R |
R |
I |
D |
L |
D |
V |
I |
K |
D |
V |
E |
L |
Y |
K |
I |
E |
P |
W |
D |
L |
Q |
E |
L |
C |
R |
I |
G |
T |
pt010221_POPTR_ |
M |
N |
T |
F |
S |
H |
V |
P |
P |
G |
F |
R |
F |
H |
P |
T |
D |
E |
E |
L |
V |
D |
Y |
Y |
L |
R |
K |
K |
V |
A |
S |
K |
R |
I |
D |
L |
D |
V |
I |
K |
D |
V |
D |
L |
Y |
K |
I |
E |
P |
W |
D |
L |
Q |
E |
L |
C |
K |
L |
G |
T |
|
AT1G12260.1 |
E |
E |
Q |
S |
D |
W |
Y |
F |
F |
S |
H |
K |
D |
K |
K |
Y |
P |
T |
G |
T |
R |
T |
N |
R |
A |
T |
K |
A |
G |
F |
W |
K |
A |
T |
G |
R |
D |
K |
A |
I |
Y |
L |
R |
H |
S |
L |
I |
G |
M |
R |
K |
T |
L |
V |
F |
Y |
K |
G |
R |
A |
pt023412_POPTR_ |
E |
E |
Q |
N |
E |
W |
Y |
F |
F |
S |
H |
K |
D |
K |
K |
Y |
P |
T |
G |
T |
R |
T |
N |
R |
A |
T |
A |
A |
G |
F |
W |
K |
A |
T |
G |
R |
D |
K |
A |
I |
Y |
S |
K |
Q |
D |
L |
I |
G |
M |
R |
K |
T |
L |
V |
F |
Y |
K |
G |
R |
A |
pt027031_POPTR_ |
E |
E |
Q |
N |
E |
W |
Y |
F |
F |
S |
H |
K |
D |
K |
K |
Y |
P |
T |
G |
T |
R |
T |
N |
R |
A |
T |
V |
A |
G |
F |
W |
K |
A |
T |
G |
R |
D |
K |
A |
I |
Y |
S |
K |
H |
D |
L |
I |
G |
M |
R |
K |
T |
L |
V |
F |
Y |
K |
G |
R |
A |
pt010221_POPTR_ |
E |
D |
Q |
N |
E |
W |
Y |
F |
F |
S |
H |
K |
D |
K |
K |
Y |
P |
T |
G |
T |
R |
T |
N |
R |
A |
T |
K |
A |
G |
F |
W |
K |
A |
T |
G |
R |
D |
K |
A |
I |
Y |
S |
R |
H |
S |
L |
I |
G |
M |
R |
K |
T |
L |
V |
F |
Y |
K |
G |
R |
A |
|
AT1G12260.1 |
P |
N |
G |
Q |
K |
S |
D |
W |
I |
M |
H |
E |
Y |
R |
L |
E |
T |
D |
E |
N |
G |
T |
P |
Q |
E |
- |
- |
- |
- |
- |
- |
- |
- |
E |
G |
W |
V |
V |
C |
R |
V |
F |
K |
K |
R |
L |
A |
A |
V |
R |
R |
M |
G |
D |
Y |
D |
S |
S |
P |
S |
pt023412_POPTR_ |
P |
N |
G |
Q |
K |
S |
D |
W |
I |
M |
H |
E |
Y |
R |
L |
E |
T |
D |
E |
N |
G |
T |
P |
Q |
A |
S |
I |
G |
R |
R |
F |
Y |
E |
E |
G |
W |
V |
V |
C |
R |
V |
F |
K |
K |
R |
L |
P |
T |
M |
R |
K |
V |
S |
E |
H |
E |
S |
V |
C |
- |
pt027031_POPTR_ |
P |
N |
G |
Q |
K |
S |
D |
W |
I |
M |
H |
E |
Y |
R |
L |
E |
T |
D |
E |
N |
G |
T |
P |
Q |
A |
- |
- |
- |
- |
- |
- |
- |
- |
K |
G |
W |
V |
V |
C |
R |
V |
F |
K |
K |
R |
I |
P |
T |
M |
P |
K |
V |
S |
E |
H |
E |
S |
V |
C |
- |
pt010221_POPTR_ |
P |
N |
G |
Q |
K |
S |
D |
L |
I |
M |
H |
E |
Y |
R |
L |
E |
T |
N |
E |
N |
G |
T |
P |
Q |
A |
- |
- |
- |
- |
- |
- |
- |
- |
K |
G |
W |
V |
V |
C |
R |
V |
F |
K |
K |
K |
M |
P |
T |
M |
R |
K |
V |
S |
D |
Y |
D |
S |
P |
C |
- |
|
AT1G12260.1 |
H |
W |
Y |
D |
D |
Q |
L |
S |
F |
M |
A |
S |
E |
L |
E |
T |
N |
G |
Q |
R |
R |
I |
L |
P |
N |
H |
H |
Q |
Q |
Q |
Q |
H |
E |
H |
Q |
Q |
H |
M |
P |
Y |
G |
L |
N |
A |
S |
A |
Y |
A |
L |
N |
N |
P |
N |
L |
Q |
C |
K |
Q |
E |
L |
pt023412_POPTR_ |
- |
W |
Y |
D |
D |
Q |
V |
A |
F |
M |
- |
H |
D |
L |
D |
S |
- |
- |
- |
- |
- |
- |
- |
P |
K |
Q |
N |
S |
Q |
P |
D |
L |
G |
Y |
Q |
F |
P |
Y |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
K |
K |
E |
I |
pt027031_POPTR_ |
- |
W |
Y |
D |
D |
Q |
V |
A |
F |
M |
- |
H |
D |
L |
D |
S |
- |
- |
- |
- |
- |
- |
- |
P |
K |
Q |
N |
F |
Q |
P |
D |
L |
G |
Y |
Q |
F |
P |
Y |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
K |
K |
E |
L |
pt010221_POPTR_ |
- |
W |
Y |
D |
D |
Q |
V |
S |
F |
M |
- |
P |
E |
T |
D |
S |
- |
- |
- |
- |
- |
- |
- |
P |
R |
R |
I |
S |
Q |
P |
Y |
A |
S |
Y |
L |
H |
H |
Y |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
K |
Q |
E |
L |
|
AT1G12260.1 |
E |
L |
H |
Y |
N |
H |
L |
V |
Q |
R |
N |
H |
L |
L |
D |
E |
S |
H |
L |
S |
F |
L |
Q |
L |
P |
Q |
L |
E |
S |
P |
K |
I |
Q |
Q |
D |
- |
- |
N |
S |
N |
C |
N |
S |
L |
- |
- |
P |
Y |
G |
T |
S |
N |
I |
D |
N |
N |
S |
S |
H |
N |
pt023412_POPTR_ |
D |
L |
Q |
Y |
Q |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
H |
D |
H |
F |
L |
Q |
L |
P |
L |
L |
Q |
S |
P |
K |
L |
L |
Q |
P |
A |
P |
T |
I |
S |
C |
N |
S |
I |
N |
A |
A |
Y |
G |
L |
- |
- |
- |
- |
- |
D |
I |
N |
Q |
A |
pt027031_POPTR_ |
D |
F |
Q |
Y |
Q |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
H |
D |
H |
F |
L |
Q |
L |
P |
L |
L |
Q |
S |
P |
K |
L |
L |
Q |
S |
A |
P |
T |
L |
S |
C |
N |
S |
I |
N |
A |
A |
Y |
G |
L |
- |
- |
- |
- |
- |
D |
I |
N |
Q |
T |
pt010221_POPTR_ |
E |
L |
P |
Y |
N |
M |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
H |
D |
P |
F |
L |
Q |
L |
P |
Q |
L |
E |
S |
P |
K |
V |
P |
Q |
S |
A |
A |
T |
A |
S |
C |
N |
S |
V |
- |
I |
A |
Y |
A |
Y |
- |
- |
- |
- |
- |
D |
R |
T |
N |
G |
|
AT1G12260.1 |
A |
N |
L |
Q |
Q |
S |
N |
I |
A |
H |
E |
E |
Q |
L |
N |
Q |
G |
N |
- |
Q |
N |
F |
S |
S |
L |
Y |
M |
N |
S |
G |
N |
- |
- |
E |
Q |
V |
M |
D |
Q |
V |
T |
D |
W |
R |
V |
L |
D |
K |
F |
V |
A |
S |
Q |
L |
S |
N |
E |
E |
A |
A |
pt023412_POPTR_ |
S |
T |
I |
Q |
S |
S |
T |
L |
T |
Q |
E |
D |
H |
I |
Q |
Q |
A |
H |
E |
Q |
S |
F |
P |
S |
I |
Y |
G |
S |
N |
N |
I |
N |
- |
E |
Q |
A |
V |
D |
Q |
V |
T |
D |
W |
R |
V |
L |
D |
K |
F |
V |
A |
S |
Q |
L |
S |
Q |
E |
D |
V |
V |
pt027031_POPTR_ |
S |
T |
F |
Q |
S |
S |
T |
L |
T |
Q |
E |
D |
H |
V |
Q |
Q |
T |
H |
E |
Q |
R |
F |
P |
T |
I |
Y |
G |
N |
N |
N |
S |
N |
H |
E |
Q |
A |
V |
D |
Q |
V |
T |
D |
W |
R |
V |
L |
D |
K |
F |
V |
A |
S |
Q |
L |
S |
H |
E |
D |
V |
I |
pt010221_POPTR_ |
S |
T |
L |
Q |
S |
S |
T |
L |
T |
Q |
E |
E |
Q |
M |
Q |
Q |
C |
H |
Q |
Q |
N |
L |
N |
S |
F |
Y |
N |
N |
N |
N |
S |
- |
- |
E |
Q |
A |
V |
D |
Q |
V |
T |
D |
W |
R |
V |
L |
D |
K |
F |
V |
A |
S |
Q |
L |
S |
H |
E |
D |
A |
S |
|
AT1G12260.1 |
T |
- |
- |
- |
- |
- |
- |
A |
S |
A |
S |
I |
Q |
N |
N |
A |
K |
D |
T |
S |
N |
A |
E |
Y |
Q |
V |
D |
E |
E |
K |
- |
- |
D |
P |
K |
R |
A |
S |
D |
M |
G |
E |
E |
Y |
T |
A |
S |
T |
S |
S |
S |
C |
Q |
I |
D |
L |
W |
K |
pt023412_POPTR_ |
K |
E |
N |
N |
H |
P |
N |
A |
S |
N |
N |
I |
F |
N |
T |
S |
- |
- |
S |
I |
H |
A |
P |
N |
I |
F |
A |
R |
H |
L |
- |
- |
- |
- |
S |
K |
Q |
D |
T |
S |
V |
P |
E |
N |
A |
S |
T |
S |
T |
S |
S |
C |
Q |
I |
D |
L |
W |
K |
pt027031_POPTR_ |
K |
E |
T |
N |
H |
P |
N |
A |
S |
N |
N |
I |
F |
N |
T |
S |
- |
- |
S |
V |
H |
A |
A |
N |
I |
L |
V |
R |
H |
L |
- |
- |
- |
- |
N |
K |
Q |
E |
A |
S |
V |
Q |
E |
N |
A |
S |
T |
S |
T |
S |
S |
C |
Q |
I |
D |
L |
W |
K |
pt010221_POPTR_ |
K |
- |
- |
- |
- |
- |
- |
G |
T |
N |
N |
Y |
S |
N |
K |
A |
- |
- |
T |
F |
H |
A |
A |
E |
Q |
M |
- |
- |
H |
M |
L |
A |
N |
D |
S |
K |
R |
S |
E |
T |
A |
Q |
E |
Y |
A |
S |
T |
S |
T |
S |
S |
C |
Q |
I |
D |
L |
W |
K |
|
|