fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031036 not found in 356aa AT1G12260.1 1st_1st 0.581012658 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12260.1     MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH
pt031036_POPTR_ MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT
                **:*******************************::*.***:***************:* 

AT1G12260.1     EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA
pt031036_POPTR_ EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLVGMRKTLVFYKGRA
                *:*.:************************************ ****:*************

AT1G12260.1     PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLS
pt031036_POPTR_ PNGQKSDWIMHEYRLETNENGIPQAKGWVVCRVFKKRMPTMRKVGDYD-SPC-WYDDQVS
                *****************:*** ** :***********:.::*::**** **. *****:*

AT1G12260.1     FMASELETNGQRRI----LPNHHQQQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHY
pt031036_POPTR_ FMP---EIDSPRRISQPYAPYHH----HYH---------------------CKQELELQY
                **.   * :. ***     * **    * *                     *******:*

AT1G12260.1     NHLVQRNHLLDESHLSFLQLPQLESPKIQQD--NSNCNS-LPYGTSNIDNNSSHNANLQQ
pt031036_POPTR_ NM----------PHDPFLQLPQLESPKVPQSAATASCNSVIAYGFDRTNGNT-----LQS
                *           .* .***********: *.  .:.*** :.** .. :.*:     **.

AT1G12260.1     SNIAHEEQLNQGN-QNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQ
pt031036_POPTR_ STLTQEEKMQQCHQQNLNSLHNNNNSEQAVDQVTDWRVLDKFVASQLSHEDASKGTNNFS
                *.:::**:::* : **:.**: *...**.:******************:*:*:..: .:.

AT1G12260.1     NNAKDTSNAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK
pt031036_POPTR_ STA--TFNAAEQMNMLANESKRSEIAQQYASTSTSSCQIDLWK
                ..*  * **  *::   : .: *::.::*:::::*********
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q E L C K I G H
pt031036_POPTR_    M N T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I D L D V I K D V D L Y K I E P W D L Q E L C K L G T
 
AT1G12260.1     E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L R H S L I G M R K T L V F Y K G R A
pt031036_POPTR_    E D Q N E W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y S R H S L V G M R K T L V F Y K G R A
 
AT1G12260.1     P N G Q K S D W I M H E Y R L E T D E N G T P Q E E G W V V C R V F K K R L A A V R R M G D Y D S S P S H W Y D D Q L S
pt031036_POPTR_    P N G Q K S D W I M H E Y R L E T N E N G I P Q A K G W V V C R V F K K R M P T M R K V G D Y D - S P C - W Y D D Q V S
 
AT1G12260.1     F M A S E L E T N G Q R R I - - - - L P N H H Q Q Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C K Q E L E L H Y
pt031036_POPTR_    F M P - - - E I D S P R R I S Q P Y A P Y H H - - - - H Y H - - - - - - - - - - - - - - - - - - - - - C K Q E L E L Q Y
 
AT1G12260.1     N H L V Q R N H L L D E S H L S F L Q L P Q L E S P K I Q Q D - - N S N C N S - L P Y G T S N I D N N S S H N A N L Q Q
pt031036_POPTR_    N M - - - - - - - - - - P H D P F L Q L P Q L E S P K V P Q S A A T A S C N S V I A Y G F D R T N G N T - - - - - L Q S
 
AT1G12260.1     S N I A H E E Q L N Q G N - Q N F S S L Y M N S G N E Q V M D Q V T D W R V L D K F V A S Q L S N E E A A T A S A S I Q
pt031036_POPTR_    S T L T Q E E K M Q Q C H Q Q N L N S L H N N N N S E Q A V D Q V T D W R V L D K F V A S Q L S H E D A S K G T N N F S
 
AT1G12260.1     N N A K D T S N A E Y Q V D E E K D P K R A S D M G E E Y T A S T S S S C Q I D L W K
pt031036_POPTR_    S T A - - T F N A A E Q M N M L A N E S K R S E I A Q Q Y A S T S T S S C Q I D L W K
 
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