fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008987 not found in 275aa AT1G12260.1 1st_1st 0.402531645 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12260.1     MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH
Os008987_Os02t0 MDTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQEKCKIGM
                *::*****************************:*::*.***:************ **** 

AT1G12260.1     EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA
Os008987_Os02t0 EEQNDWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKPIYARSCLVGMRKTLVFYKGRA
                ***.********************** ***********.** * .*:*************

AT1G12260.1     PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLS
Os008987_Os02t0 PNGQKSDWIMHEYRLETNENGTTPEEGWVVCRVFKKRVATVRRMA--DGSPC-WFDDHGA
                *****************:****. *************:*:****.  *.**. *:**: :

AT1G12260.1     FMAS------------ELETNGQRRILPNHHQQQQHEHQQHMPYGLNASAYALNNPNLQC
Os008987_Os02t0 VGASCSRCTVTASRSWSTTTSCRRR------------------------------PS--C
                . **            .  *. :**                              *.  *

AT1G12260.1     KQELELHYNHLVQRNHLLDESHLSFLQLPQLES-------PKIQQDNSNCNSLPYGTSNI
Os008987_Os02t0 --SIFLSWRAPSRRRRLLRRR-------PTLAATSDRRRPPPLLLTTTKPPAPPRSSSR-
                  .: * :.   :*.:** .        * * :       * :   .::  : * .:*. 

AT1G12260.1     DNNSSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSN
Os008987_Os02t0 --------------------------------------------RRWRL--------FTW
                                                              **:        :: 

AT1G12260.1     EEAATASASIQNNAKDTSNAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK
Os008987_Os02t0 PAPASASASTRR------------------------------------------
                  .*:**** :.
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q E L C K I G H
Os008987_Os02t0    M D T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K K I D L D V I K D V D L Y K I E P W D L Q E K C K I G M
 
AT1G12260.1     E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L R H S L I G M R K T L V F Y K G R A
Os008987_Os02t0    E E Q N D W Y F F S H K D K K Y P T G T R T N R A T G A G F W K A T G R D K P I Y A R S C L V G M R K T L V F Y K G R A
 
AT1G12260.1     P N G Q K S D W I M H E Y R L E T D E N G T P Q E E G W V V C R V F K K R L A A V R R M G D Y D S S P S H W Y D D Q L S
Os008987_Os02t0    P N G Q K S D W I M H E Y R L E T N E N G T T P E E G W V V C R V F K K R V A T V R R M A - - D G S P C - W F D D H G A
 
AT1G12260.1     F M A S - - - - - - - - - - - - E L E T N G Q R R I L P N H H Q Q Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C
Os008987_Os02t0    V G A S C S R C T V T A S R S W S T T T S C R R R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P S - - C
 
AT1G12260.1     K Q E L E L H Y N H L V Q R N H L L D E S H L S F L Q L P Q L E S - - - - - - - P K I Q Q D N S N C N S L P Y G T S N I
Os008987_Os02t0    - - S I F L S W R A P S R R R R L L R R R - - - - - - - P T L A A T S D R R R P P P L L L T T T K P P A P P R S S S R -
 
AT1G12260.1     D N N S S H N A N L Q Q S N I A H E E Q L N Q G N Q N F S S L Y M N S G N E Q V M D Q V T D W R V L D K F V A S Q L S N
Os008987_Os02t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R W R L - - - - - - - - F T W
 
AT1G12260.1     E E A A T A S A S I Q N N A K D T S N A E Y Q V D E E K D P K R A S D M G E E Y T A S T S S S C Q I D L W K
Os008987_Os02t0    P A P A S A S A S T R R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0