fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb011133 not found in 363aa AT1G12260.1 not_1st 0.422784810 II
Sb002781 not found in 339aa AT1G12260.1 not_1st 0.411392405 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G12260.1     -------MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQ
Sb002781_Sorbi1 MGMSSAQAQTQQLVPPGFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVDLYKIEPWDLQ
Sb011133_Sorbi1 -------MDTFSHVPPGFRFHPTDEELVDYYLRKKVASNKIDLDVIKDVDLYKIEPWDLQ
                        :: . *************************.:*:::.***:***********

AT1G12260.1     ELCKI---GHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYL--RHSLIG
Sb002781_Sorbi1 EKCRLGGPGEEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYANKQRQLVG
Sb011133_Sorbi1 EKCKI---GMEEQNEWYFFSHKDKKYPTGSRTNRATTAGFWKATGRDKPIYT--KSCLVG
                * *::   * ***.:**************:****** ***********.**   :  *:*

AT1G12260.1     MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTP----------------QEEGWVVCR
Sb002781_Sorbi1 MRKTLVYYKGRAPNGHKSDWIMHEYRLETNENGPP----------------QEEGWVVCR
Sb011133_Sorbi1 MRKTLVFYRGRAPNGQKSDWIMHEYRLETTENGTAPVPESIFFCLPHEMVVQEEGWVVCR
                ******:*:******:************* ***..                *********

AT1G12260.1     VFKKRLAAVRRMGDYDSSPSHWYDDQL---SFMASELETNGQRRILPNHH--------QQ
Sb002781_Sorbi1 VFKKRLPTTRRESDHDAPC--WYVDD--DGTFMHDL---NSPMSGLPPHH------SIAQ
Sb011133_Sorbi1 VFKKRVATVRRMAD-GAP---WFDDHVAGGGFMPDLI--GSPRQLMHHHHHPNAVYSGGQ
                *****:.:.** .* .:.   *: *.     ** .    ..    :  **         *

AT1G12260.1     QQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQ-LE
Sb002781_Sorbi1 LQEQHLQ-----------MLNN---SYKRELKLQ--------FQMPSHH-ILNAIPHELE
Sb011133_Sorbi1 QQLYHC---------------------KPELEYH--------HLLPSQDAFLQQLPQLVE
                 *  *                      * **: :        . : . .  :  :*: :*

AT1G12260.1     SPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQ
Sb002781_Sorbi1 SP-----------------------SFHSLLVSPD--HQTKVQHAHQHVQLM------EH
Sb011133_Sorbi1 SPK-----------PPPAYIAAAQGSCSLQLQSPD--EATGYT-TQQPALMM------EA
                **                       *    * ..:  .       :*    :      * 

AT1G12260.1     VM---DQVTDWRVLDKFVASQL---SNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRA
Sb002781_Sorbi1 AV---DQVTDWRVLDKFVASQL---SNDAAKGVDY--------TDEGDILQVNEKQ-EVA
Sb011133_Sorbi1 AAYMDDSVTDWRVLDKFVASQLFSHGDGTAKEAGY--------SSPAQVFQAENKQPEEA
                .    *.***************   .:  *  ..         :. .:    ::*: : *

AT1G12260.1     SDMGEEYTASTSS-SCQIDLWK
Sb002781_Sorbi1 TD----YASTSTS-SSQVDPWK
Sb011133_Sorbi1 LD----YASTSASGGGEANMWK
                 *    *:::::* . : : **
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     - - - - - - - M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q
Sb002781_Sorbi1    M G M S S A Q A Q T Q Q L V P P G F R F H P T D E E L V D Y Y L R K K V A S R R I D L N V I K D V D L Y K I E P W D L Q
Sb011133_Sorbi1    - - - - - - - M D T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S N K I D L D V I K D V D L Y K I E P W D L Q
 
AT1G12260.1     E L C K I - - - G H E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L - - R H S L I G
Sb002781_Sorbi1    E K C R L G G P G E E E Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K P I Y A N K Q R Q L V G
Sb011133_Sorbi1    E K C K I - - - G M E E Q N E W Y F F S H K D K K Y P T G S R T N R A T T A G F W K A T G R D K P I Y T - - K S C L V G
 
AT1G12260.1     M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T D E N G T P - - - - - - - - - - - - - - - - Q E E G W V V C R
Sb002781_Sorbi1    M R K T L V Y Y K G R A P N G H K S D W I M H E Y R L E T N E N G P P - - - - - - - - - - - - - - - - Q E E G W V V C R
Sb011133_Sorbi1    M R K T L V F Y R G R A P N G Q K S D W I M H E Y R L E T T E N G T A P V P E S I F F C L P H E M V V Q E E G W V V C R
 
AT1G12260.1     V F K K R L A A V R R M G D Y D S S P S H W Y D D Q L - - - S F M A S E L E T N G Q R R I L P N H H - - - - - - - - Q Q
Sb002781_Sorbi1    V F K K R L P T T R R E S D H D A P C - - W Y V D D - - D G T F M H D L - - - N S P M S G L P P H H - - - - - - S I A Q
Sb011133_Sorbi1    V F K K R V A T V R R M A D - G A P - - - W F D D H V A G G G F M P D L I - - G S P R Q L M H H H H H P N A V Y S G G Q
 
AT1G12260.1     Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C K Q E L E L H Y N H L V Q R N H L L D E S H L S F L Q L P Q - L E
Sb002781_Sorbi1    L Q E Q H L Q - - - - - - - - - - - M L N N - - - S Y K R E L K L Q - - - - - - - - F Q M P S H H - I L N A I P H E L E
Sb011133_Sorbi1    Q Q L Y H C - - - - - - - - - - - - - - - - - - - - - K P E L E Y H - - - - - - - - H L L P S Q D A F L Q Q L P Q L V E
 
AT1G12260.1     S P K I Q Q D N S N C N S L P Y G T S N I D N N S S H N A N L Q Q S N I A H E E Q L N Q G N Q N F S S L Y M N S G N E Q
Sb002781_Sorbi1    S P - - - - - - - - - - - - - - - - - - - - - - - S F H S L L V S P D - - H Q T K V Q H A H Q H V Q L M - - - - - - E H
Sb011133_Sorbi1    S P K - - - - - - - - - - - P P P A Y I A A A Q G S C S L Q L Q S P D - - E A T G Y T - T Q Q P A L M M - - - - - - E A
 
AT1G12260.1     V M - - - D Q V T D W R V L D K F V A S Q L - - - S N E E A A T A S A S I Q N N A K D T S N A E Y Q V D E E K D P K R A
Sb002781_Sorbi1    A V - - - D Q V T D W R V L D K F V A S Q L - - - S N D A A K G V D Y - - - - - - - - T D E G D I L Q V N E K Q - E V A
Sb011133_Sorbi1    A A Y M D D S V T D W R V L D K F V A S Q L F S H G D G T A K E A G Y - - - - - - - - S S P A Q V F Q A E N K Q P E E A
 
AT1G12260.1     S D M G E E Y T A S T S S - S C Q I D L W K
Sb002781_Sorbi1    T D - - - - Y A S T S T S - S S Q V D P W K
Sb011133_Sorbi1    L D - - - - Y A S T S A S G G G E A N M W K
 
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