fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029683 not found in 450aa AT1G12260.1 1st_1st 0.454430379 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12260.1     MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH
Sb029683_Sorbi1 MDAFTHVPPGFRFHPTDEELVDYYLRKKVAMKKIDLDVIKDVDLYKIEPWDLQEKCRIGA
                *::*:************************* *:*::*.***:************ *:** 

AT1G12260.1     EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA
Sb029683_Sorbi1 EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYVKNCLVGMRKTLVFYKGRA
                ***.:*********************.***********.**:::.*:*************

AT1G12260.1     PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRM-GDYDSSPSHWYDDQL
Sb029683_Sorbi1 PNGQKSDWIMHEYRLETNENGIPHEEGWVVCRVFRKRLATVQRMVGD---SP-YWFNDHA
                *****************:*** *:**********:****:*:** **   ** :*::*: 

AT1G12260.1     SFMASELETNGQRRILPNHHQQQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHL
Sb029683_Sorbi1 GFMPPEL---GSPRQAAHHQQSAMMYHRQQSSY--------------PCKVELE--YHHL
                .**..**   *. *  .:*:*.    *:*: .*               ** ***  *:**

AT1G12260.1     VQRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHE
Sb029683_Sorbi1 LPQEHFLQ-------QLPPLESPK----------LPDLIGQVD------ATLQPCGLTPE
                : ::*:*:       *** *****          **   .::*      *.** ..:: *

AT1G12260.1     EQLNQGN-QNFSS--LYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQNNAK
Sb029683_Sorbi1 HGLVRYTVQELQAEPLYLTARNV----SGTDWRALDKFVASQLSNDTTLKESTSYSNPTQ
                . * : . *::.:  **:.: *     . ****.***********: : . *:* .* ::

AT1G12260.1     DTSNAEYQVDEEKDPKRASDMGEEYTASTSSSC--QIDLWK-
Sb029683_Sorbi1 -----VFQQSEEKE--EALDY-----VSTSASCGGDNDFWKL
                      :* .***:  .* *      .***:**  : *:**
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q E L C K I G H
Sb029683_Sorbi1    M D A F T H V P P G F R F H P T D E E L V D Y Y L R K K V A M K K I D L D V I K D V D L Y K I E P W D L Q E K C R I G A
 
AT1G12260.1     E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L R H S L I G M R K T L V F Y K G R A
Sb029683_Sorbi1    E E Q N E W Y F F S H K D K K Y P T G T R T N R A T T A G F W K A T G R D K P I Y V K N C L V G M R K T L V F Y K G R A
 
AT1G12260.1     P N G Q K S D W I M H E Y R L E T D E N G T P Q E E G W V V C R V F K K R L A A V R R M - G D Y D S S P S H W Y D D Q L
Sb029683_Sorbi1    P N G Q K S D W I M H E Y R L E T N E N G I P H E E G W V V C R V F R K R L A T V Q R M V G D - - - S P - Y W F N D H A
 
AT1G12260.1     S F M A S E L E T N G Q R R I L P N H H Q Q Q Q H E H Q Q H M P Y G L N A S A Y A L N N P N L Q C K Q E L E L H Y N H L
Sb029683_Sorbi1    G F M P P E L - - - G S P R Q A A H H Q Q S A M M Y H R Q Q S S Y - - - - - - - - - - - - - - P C K V E L E - - Y H H L
 
AT1G12260.1     V Q R N H L L D E S H L S F L Q L P Q L E S P K I Q Q D N S N C N S L P Y G T S N I D N N S S H N A N L Q Q S N I A H E
Sb029683_Sorbi1    L P Q E H F L Q - - - - - - - Q L P P L E S P K - - - - - - - - - - L P D L I G Q V D - - - - - - A T L Q P C G L T P E
 
AT1G12260.1     E Q L N Q G N - Q N F S S - - L Y M N S G N E Q V M D Q V T D W R V L D K F V A S Q L S N E E A A T A S A S I Q N N A K
Sb029683_Sorbi1    H G L V R Y T V Q E L Q A E P L Y L T A R N V - - - - S G T D W R A L D K F V A S Q L S N D T T L K E S T S Y S N P T Q
 
AT1G12260.1     D T S N A E Y Q V D E E K D P K R A S D M G E E Y T A S T S S S C - - Q I D L W K -
Sb029683_Sorbi1    - - - - - V F Q Q S E E K E - - E A L D Y - - - - - V S T S A S C G G D N D F W K L
 
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