fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029683 not found in 450aa AT1G12260.1 1st_1st 0.454430379 Ia
Sb011133 not found in 363aa AT1G12260.1 not_1st 0.422784810 II
Sb002781 not found in 339aa AT1G12260.1 not_1st 0.411392405 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G12260.1     -------MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQ
Sb029683_Sorbi1 -------MDAFTHVPPGFRFHPTDEELVDYYLRKKVAMKKIDLDVIKDVDLYKIEPWDLQ
Sb011133_Sorbi1 -------MDTFSHVPPGFRFHPTDEELVDYYLRKKVASNKIDLDVIKDVDLYKIEPWDLQ
Sb002781_Sorbi1 MGMSSAQAQTQQLVPPGFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVDLYKIEPWDLQ
                        ::   ************************ .:*:::.***:***********

AT1G12260.1     ELCKI---GHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYL--RHSLIG
Sb029683_Sorbi1 EKCRI---GAEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYV--KNCLVG
Sb011133_Sorbi1 EKCKI---GMEEQNEWYFFSHKDKKYPTGSRTNRATTAGFWKATGRDKPIYT--KSCLVG
Sb002781_Sorbi1 EKCRLGGPGEEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYANKQRQLVG
                * *::   * ***.:**************:****** ***********.**   :  *:*

AT1G12260.1     MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENG-----------TPQ-----EEGWVVCR
Sb029683_Sorbi1 MRKTLVFYKGRAPNGQKSDWIMHEYRLETNENG-----------IPH-----EEGWVVCR
Sb011133_Sorbi1 MRKTLVFYRGRAPNGQKSDWIMHEYRLETTENGTAPVPESIFFCLPHEMVVQEEGWVVCR
Sb002781_Sorbi1 MRKTLVYYKGRAPNGHKSDWIMHEYRLETNENG-----------PPQ-----EEGWVVCR
                ******:*:******:************* ***            *:     ********

AT1G12260.1     VFKKRLAAVRRMGDYDSSPSHWYDDQ---LSFMASELETNGQRRILPNHHQ--QQQHEHQ
Sb029683_Sorbi1 VFRKRLATVQRM--VGDSP-YWFNDH---AGFMPPEL---GSPRQAAHHQQ--SAMMYHR
Sb011133_Sorbi1 VFKKRVATVRRM--ADGAP--WFDDHVAGGGFMPDLI---GSPRQLMHHHHHPNAVYSGG
Sb002781_Sorbi1 VFKKRLPTTRRE-SDHDAP-CWYVDD--DGTFMHDLN---SPMSGLPPHHSIAQLQEQHL
                **:**:.:.:*     .:*  *: *.     **       .       *:   .      

AT1G12260.1     QHMPYGLNASAYALNNPNLQCKQELELHYNHLVQ-RNHLLDESHLSFLQLPQL-ESPKIQ
Sb029683_Sorbi1 QQSSY--------------PCKVELE--YHHLLP-QEHFLQ-------QLPPL-ESPK--
Sb011133_Sorbi1 QQQLY--------------HCKPELE--YHHLLPSQDAFLQ-------QLPQLVESPK--
Sb002781_Sorbi1 QM-----------LNN---SYKRELK--LQFQMP-SHHILN-------AIPHELESPSFH
                *                    * **:   :. :   . :*:        :*   ***.  

AT1G12260.1     QDNSNCNSLPYGTSNIDNNSSHNANLQQSNI---AHEEQ--LNQGNQN-----FSSLYMN
Sb029683_Sorbi1 --------LPDLIGQVD------ATLQPCGL---TPEHGL-VRYTVQE---LQAEPLYLT
Sb011133_Sorbi1 --------PPP--AYIA------AAQGSCSLQLQSPDEA--TGYTTQQPALMMEAAAYM-
Sb002781_Sorbi1 -----------------------------SL-LVSPDHQTKVQHAHQH-VQLMEHAV---
                                             .:   : :.        *.       .    

AT1G12260.1     SGNEQVMDQVTDWRVLDKFVASQL--SNEEAATASASIQNNAKDTSNAEYQVDEEKDPKR
Sb029683_Sorbi1 ARN----VSGTDWRALDKFVASQL--SNDTTLKESTSYSNPTQ-----VFQ--QSEEKEE
Sb011133_Sorbi1 --D----DSVTDWRVLDKFVASQLFSHGDGTAKEA-GYSSPAQ-----VFQA-ENKQPEE
Sb002781_Sorbi1 -------DQVTDWRVLDKFVASQL--SND--AAKGVDYTDEGD-----ILQV--NEKQEV
                        . ****.*********   .:     . .  .  .       *   .:. : 

AT1G12260.1     ASDMGEEYTASTSSSC--QIDLWK-
Sb029683_Sorbi1 ALDY-----VSTSASCGGDNDFWKL
Sb011133_Sorbi1 ALDY-----ASTSASGGGEANMWK-
Sb002781_Sorbi1 ATDY-----ASTSTSS-SQVDPWK-
                * *      .***:*   : : **
BoxShade v3.31 C (beta, 970507) Output
AT1G12260.1     - - - - - - - M N S F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D F I K D I D L Y K I E P W D L Q
Sb029683_Sorbi1    - - - - - - - M D A F T H V P P G F R F H P T D E E L V D Y Y L R K K V A M K K I D L D V I K D V D L Y K I E P W D L Q
Sb011133_Sorbi1    - - - - - - - M D T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S N K I D L D V I K D V D L Y K I E P W D L Q
Sb002781_Sorbi1    M G M S S A Q A Q T Q Q L V P P G F R F H P T D E E L V D Y Y L R K K V A S R R I D L N V I K D V D L Y K I E P W D L Q
 
AT1G12260.1     E L C K I - - - G H E E Q S D W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y L - - R H S L I G
Sb029683_Sorbi1    E K C R I - - - G A E E Q N E W Y F F S H K D K K Y P T G T R T N R A T T A G F W K A T G R D K P I Y V - - K N C L V G
Sb011133_Sorbi1    E K C K I - - - G M E E Q N E W Y F F S H K D K K Y P T G S R T N R A T T A G F W K A T G R D K P I Y T - - K S C L V G
Sb002781_Sorbi1    E K C R L G G P G E E E Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K P I Y A N K Q R Q L V G
 
AT1G12260.1     M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T D E N G - - - - - - - - - - - T P Q - - - - - E E G W V V C R
Sb029683_Sorbi1    M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T N E N G - - - - - - - - - - - I P H - - - - - E E G W V V C R
Sb011133_Sorbi1    M R K T L V F Y R G R A P N G Q K S D W I M H E Y R L E T T E N G T A P V P E S I F F C L P H E M V V Q E E G W V V C R
Sb002781_Sorbi1    M R K T L V Y Y K G R A P N G H K S D W I M H E Y R L E T N E N G - - - - - - - - - - - P P Q - - - - - E E G W V V C R
 
AT1G12260.1     V F K K R L A A V R R M G D Y D S S P S H W Y D D Q - - - L S F M A S E L E T N G Q R R I L P N H H Q - - Q Q Q H E H Q
Sb029683_Sorbi1    V F R K R L A T V Q R M - - V G D S P - Y W F N D H - - - A G F M P P E L - - - G S P R Q A A H H Q Q - - S A M M Y H R
Sb011133_Sorbi1    V F K K R V A T V R R M - - A D G A P - - W F D D H V A G G G F M P D L I - - - G S P R Q L M H H H H H P N A V Y S G G
Sb002781_Sorbi1    V F K K R L P T T R R E - S D H D A P - C W Y V D D - - D G T F M H D L N - - - S P M S G L P P H H S I A Q L Q E Q H L
 
AT1G12260.1     Q H M P Y G L N A S A Y A L N N P N L Q C K Q E L E L H Y N H L V Q - R N H L L D E S H L S F L Q L P Q L - E S P K I Q
Sb029683_Sorbi1    Q Q S S Y - - - - - - - - - - - - - - P C K V E L E - - Y H H L L P - Q E H F L Q - - - - - - - Q L P P L - E S P K - -
Sb011133_Sorbi1    Q Q Q L Y - - - - - - - - - - - - - - H C K P E L E - - Y H H L L P S Q D A F L Q - - - - - - - Q L P Q L V E S P K - -
Sb002781_Sorbi1    Q M - - - - - - - - - - - L N N - - - S Y K R E L K - - L Q F Q M P - S H H I L N - - - - - - - A I P H E L E S P S F H
 
AT1G12260.1     Q D N S N C N S L P Y G T S N I D N N S S H N A N L Q Q S N I - - - A H E E Q - - L N Q G N Q N - - - - - F S S L Y M N
Sb029683_Sorbi1    - - - - - - - - L P D L I G Q V D - - - - - - A T L Q P C G L - - - T P E H G L - V R Y T V Q E - - - L Q A E P L Y L T
Sb011133_Sorbi1    - - - - - - - - P P P - - A Y I A - - - - - - A A Q G S C S L Q L Q S P D E A - - T G Y T T Q Q P A L M M E A A A Y M -
Sb002781_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L - L V S P D H Q T K V Q H A H Q H - V Q L M E H A V - - -
 
AT1G12260.1     S G N E Q V M D Q V T D W R V L D K F V A S Q L - - S N E E A A T A S A S I Q N N A K D T S N A E Y Q V D E E K D P K R
Sb029683_Sorbi1    A R N - - - - V S G T D W R A L D K F V A S Q L - - S N D T T L K E S T S Y S N P T Q - - - - - V F Q - - Q S E E K E E
Sb011133_Sorbi1    - - D - - - - D S V T D W R V L D K F V A S Q L F S H G D G T A K E A - G Y S S P A Q - - - - - V F Q A - E N K Q P E E
Sb002781_Sorbi1    - - - - - - - D Q V T D W R V L D K F V A S Q L - - S N D - - A A K G V D Y T D E G D - - - - - I L Q V - - N E K Q E V
 
AT1G12260.1     A S D M G E E Y T A S T S S S C - - Q I D L W K -
Sb029683_Sorbi1    A L D Y - - - - - V S T S A S C G G D N D F W K L
Sb011133_Sorbi1    A L D Y - - - - - A S T S A S G G G E A N M W K -
Sb002781_Sorbi1    A T D Y - - - - - A S T S T S S - S Q V D P W K -
 
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