fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009253 not found in 261aa AT5G52020.1 1st_not 0.460580912 II
Os010906 not found in 200aa AT1G12630.1 not_1st 0.423236514 II
Gm011299 not found in 156aa AT1G12630.1 not_1st 0.456431535 II
Gm002216 not found in 183aa AT1G12630.1 not_1st 0.443983402 II
Gm028667 not found in 205aa AT1G12630.1 not_1st 0.439834024 II
Pt031507 not found in 177aa AT1G12630.1 not_1st 0.493775933 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G12630.1     -----------------------------------------------MNSSMASAGL---
gm002216_Glyma0 ---------------------------------------------------MAPSSS---
Os009253_Os02t0 MADLTEHPSPTAPPQVQTAGLPAAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEP
gm028667_Glyma1 MDGNSFGNVP--PPPIQ------------------------------VPDNLAISSSSSP
gm011299_Glyma0 ---------------------------------------------------MASSSS---
Os010906_Os03t0 MD---------------------------------------------RDESLGTQPLTGR
pt031507_POPTR_ ---------------------------------------------------MATTS----
                                                                   :        

AT1G12630.1     --GSRRKDPV------YRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAM
gm002216_Glyma0 --PSSKRHPL------FHGIRCRGRKWVSEIREPRKASRIWLGTFPTPEMAAAAYDVAAL
Os009253_Os02t0 SPRSSGKHAF------YRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAAR
gm028667_Glyma1 TPTTSSPSPTPSGGFRYRGTRCRSGKWVSEIREPRKTNRIWLGTYPTAEMAAAAYDVAAL
gm011299_Glyma0 -LSSSKRHPL------YHGIRCRGGKWVTEIREPRKTNRIWLGTFLTPEMAAAAYDVAAL
Os010906_Os03t0 RVRADTRHPV------YRGIRLRSGKWVSEIREPGKSSRIWLGTYPTPEMAAAAYDAAAL
pt031507_POPTR_ --SNSKRHPM------YHGIRCRGGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVAAL
                        .       ::* * *. ***:***** *: ******:  .********.** 

AT1G12630.1     ALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAA----MKGCE-----------EG
gm002216_Glyma0 ALKGDGAVLNLPHSVSKYQMPLTNSPADIRSAASAAAA----MIKAE--------TETEA
Os009253_Os02t0 ALRGADAVLNFPGATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAA
gm028667_Glyma1 ALKGPDTPVNFPNSILSYPIPASLSSTDIRAAAAAAAQARI-VRAPQ-----------ES
gm011299_Glyma0 ALKGGEAVLNFPDSVGGYPVPASKSPADIRTAAIAAAE----LMKP------------EA
Os010906_Os03t0 ALRGADAALNFPGTATSRPAPASGSPDDIRAAAAAAAA----MIGSG-------------
pt031507_POPTR_ ALKGNGAVLNFPSSVGTYPVPATASSTDIRNAAAAAAA----LKKA------------EL
                **:*  : :*:* :      * : *. *** ** ***     :                 

AT1G12630.1     EEEKKAKEKKSSSSKSRARECHVDNDVGSSSW-CGTEFMDEEEVLNMPNLLANMAEGMMV
gm002216_Glyma0 THNHNMNIA------SITDNEA--TYTASTSW-FETDFIDEEVIFGMPSLLVDMAGGMLL
Os009253_Os02t0 EHHQQQQQQQYGSGSPAADDVS--GYPPMEGGIGNDDFMDEEAIFELPQLLRNMAAGMMM
gm028667_Glyma1 EETVNPDDGGQGLSERR------------------EEYIDEDELLNMPNLLDEMARGMQV
gm011299_Glyma0 SHNN-------------------------------NNFMDEEAIFSMPSLLVDMAGGMLL
Os010906_Os03t0 ---HRGNQRAADASTSRAATAAPEAAVAAGAG-DQKRVVDEDDVFEMPRLLVSMAEGLMM
pt031507_POPTR_ SYNEALVDQ------PRNDHNAIGAYLASS----GEEFVDEEALFDMPNLLVDMAGGMLL
                                                      :**: :: :* ** .** *: :

AT1G12630.1     APPSWMGS--------RPSDDSPE-NSNDEDLWGY---
gm002216_Glyma0 SPPR-MSP--------PPSDNSLE-KQNGETLWSYF--
Os009253_Os02t0 SPPR-LSP--------TTSDVSPEPSEAGESLWSYRDP
gm028667_Glyma1 SPLR-ITS--------YSSDDSPG-NSDGDNLWSYTL-
gm011299_Glyma0 SPPR-M-S--------PPSDDSTQ-SYVGETLWNF---
Os010906_Os03t0 SPPR-LSPSTDGVGGVSPEDDE---DEDGMSLWNHS--
pt031507_POPTR_ SPPR-ITS--------PPSDDSQG-NSDGESLWSYF--
                :*   : .         ..* .   .  .  **..
BoxShade v3.31 C (beta, 970507) Output
AT1G12630.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N S S M A S A G L - - -
gm002216_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A P S S S - - -
Os009253_Os02t0    M A D L T E H P S P T A P P Q V Q T A G L P A A A S P G P A S P H S P S E Q G D K T A P G A A T A S T M T T A S S G E P
gm028667_Glyma1    M D G N S F G N V P - - P P P I Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V P D N L A I S S S S S P
gm011299_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S S - - -
Os010906_Os03t0    M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R D E S L G T Q P L T G R
pt031507_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A T T S - - - -
 
AT1G12630.1     - - G S R R K D P V - - - - - - Y R G I R C R S G K W V S E I R E P R K T T R I W L G T Y P M A E M A A A A Y D V A A M
gm002216_Glyma0    - - P S S K R H P L - - - - - - F H G I R C R G R K W V S E I R E P R K A S R I W L G T F P T P E M A A A A Y D V A A L
Os009253_Os02t0    S P R S S G K H A F - - - - - - Y R G I R C R S G K W V S E I R E P R K A R R I W L G T Y P T A E M A A A A Y D V A A R
gm028667_Glyma1    T P T T S S P S P T P S G G F R Y R G T R C R S G K W V S E I R E P R K T N R I W L G T Y P T A E M A A A A Y D V A A L
gm011299_Glyma0    - L S S S K R H P L - - - - - - Y H G I R C R G G K W V T E I R E P R K T N R I W L G T F L T P E M A A A A Y D V A A L
Os010906_Os03t0    R V R A D T R H P V - - - - - - Y R G I R L R S G K W V S E I R E P G K S S R I W L G T Y P T P E M A A A A Y D A A A L
pt031507_POPTR_    - - S N S K R H P M - - - - - - Y H G I R C R G G K W V S E I R E P R K T T R I W L G T F P K P E M A A A A Y D V A A L
 
AT1G12630.1     A L K G R E A V L N F P G S V G S Y P V P E S T S A A D I R A A A A A A A A - - - - M K G C E - - - - - - - - - - - E G
gm002216_Glyma0    A L K G D G A V L N L P H S V S K Y Q M P L T N S P A D I R S A A S A A A A - - - - M I K A E - - - - - - - - T E T E A
Os009253_Os02t0    A L R G A D A V L N F P G A T A S R P V P A S A S P A D I R A A A A A A A A A A A H L E R P H G P T G T A Y P A T A A A
gm028667_Glyma1    A L K G P D T P V N F P N S I L S Y P I P A S L S S T D I R A A A A A A A Q A R I - V R A P Q - - - - - - - - - - - E S
gm011299_Glyma0    A L K G G E A V L N F P D S V G G Y P V P A S K S P A D I R T A A I A A A E - - - - L M K P - - - - - - - - - - - - E A
Os010906_Os03t0    A L R G A D A A L N F P G T A T S R P A P A S G S P D D I R A A A A A A A A - - - - M I G S G - - - - - - - - - - - - -
pt031507_POPTR_    A L K G N G A V L N F P S S V G T Y P V P A T A S S T D I R N A A A A A A A - - - - L K K A - - - - - - - - - - - - E L
 
AT1G12630.1     E E E K K A K E K K S S S S K S R A R E C H V D N D V G S S S W - C G T E F M D E E E V L N M P N L L A N M A E G M M V
gm002216_Glyma0    T H N H N M N I A - - - - - - S I T D N E A - - T Y T A S T S W - F E T D F I D E E V I F G M P S L L V D M A G G M L L
Os009253_Os02t0    E H H Q Q Q Q Q Q Q Y G S G S P A A D D V S - - G Y P P M E G G I G N D D F M D E E A I F E L P Q L L R N M A A G M M M
gm028667_Glyma1    E E T V N P D D G G Q G L S E R R - - - - - - - - - - - - - - - - - - E E Y I D E D E L L N M P N L L D E M A R G M Q V
gm011299_Glyma0    S H N N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N F M D E E A I F S M P S L L V D M A G G M L L
Os010906_Os03t0    - - - H R G N Q R A A D A S T S R A A T A A P E A A V A A G A G - D Q K R V V D E D D V F E M P R L L V S M A E G L M M
pt031507_POPTR_    S Y N E A L V D Q - - - - - - P R N D H N A I G A Y L A S S - - - - G E E F V D E E A L F D M P N L L V D M A G G M L L
 
AT1G12630.1     A P P S W M G S - - - - - - - - R P S D D S P E - N S N D E D L W G Y - - -
gm002216_Glyma0    S P P R - M S P - - - - - - - - P P S D N S L E - K Q N G E T L W S Y F - -
Os009253_Os02t0    S P P R - L S P - - - - - - - - T T S D V S P E P S E A G E S L W S Y R D P
gm028667_Glyma1    S P L R - I T S - - - - - - - - Y S S D D S P G - N S D G D N L W S Y T L -
gm011299_Glyma0    S P P R - M - S - - - - - - - - P P S D D S T Q - S Y V G E T L W N F - - -
Os010906_Os03t0    S P P R - L S P S T D G V G G V S P E D D E - - - D E D G M S L W N H S - -
pt031507_POPTR_    S P P R - I T S - - - - - - - - P P S D D S Q G - N S D G E S L W S Y F - -
 
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