fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031507 not found in 177aa AT1G12630.1 not_1st 0.493775933 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12630.1     MNSSMASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVA
pt031507_POPTR_ ----MATTSSNSKRH-PMYHGIRCRGGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVA
                    **::. .*:*: *:*:*****.********************:* .**********

AT1G12630.1     AMALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSS
pt031507_POPTR_ ALALKGNGAVLNFPSSVGTYPVPATASSTDIRNAAAAAAAL---------KKAELSYNEA
                *:****. ******.***:**** ::*::*** *******:         ***: . ..:

AT1G12630.1     SKSRARECHVDNDVG---SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPS
pt031507_POPTR_ LVDQPRNDH--NAIGAYLASS--GEEFVDEEALFDMPNLLVDMAGGMLLSPPR-ITSPPS
                  .:.*: *  * :*   :**  * **:*** :::*****.:** **:::**  : * **

AT1G12630.1     DDSPENSNDEDLWGY-
pt031507_POPTR_ DDSQGNSDGESLWSYF
                ***  **:.*.**.*
BoxShade v3.31 C (beta, 970507) Output
AT1G12630.1     M N S S M A S A G L G S R R K D P V Y R G I R C R S G K W V S E I R E P R K T T R I W L G T Y P M A E M A A A A Y D V A
pt031507_POPTR_    - - - - M A T T S S N S K R H - P M Y H G I R C R G G K W V S E I R E P R K T T R I W L G T F P K P E M A A A A Y D V A
 
AT1G12630.1     A M A L K G R E A V L N F P G S V G S Y P V P E S T S A A D I R A A A A A A A A M K G C E E G E E E K K A K E K K S S S
pt031507_POPTR_    A L A L K G N G A V L N F P S S V G T Y P V P A T A S S T D I R N A A A A A A A L - - - - - - - - - K K A E L S Y N E A
 
AT1G12630.1     S K S R A R E C H V D N D V G - - - S S S W C G T E F M D E E E V L N M P N L L A N M A E G M M V A P P S W M G S R P S
pt031507_POPTR_    L V D Q P R N D H - - N A I G A Y L A S S - - G E E F V D E E A L F D M P N L L V D M A G G M L L S P P R - I T S P P S
 
AT1G12630.1     D D S P E N S N D E D L W G Y -
pt031507_POPTR_    D D S Q G N S D G E S L W S Y F
 
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