fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012166 not found in 176aa AT1G12630.1 1st_1st 0.502074688 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12630.1     MNSSMASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVA
pt012166_POPTR_ ----MATTSSSSKRH-PMYRGIRSRSGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVA
                    **::. .*:*: *:*****.**********************:* .**********

AT1G12630.1     AMALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSS
pt012166_POPTR_ VLALKGADAVLNFPSSVGTYPVPASTSPTDIRNAANAAAALKKAEMSYNEALVEQPRN--
                .:**** :******.***:**** ***.:*** ** ****:* .* . :*  .:: :.  

AT1G12630.1     SKSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDS
pt012166_POPTR_ ------DCAVGTFLASG---GEEFVDEEALFDMPNLLVDMAGGMLLSPPRITPS-PSDDS
                      :* *.. :.*.   * **:*** :::*****.:** **:::**    * *****

AT1G12630.1     PENSNDEDLWGY-
pt012166_POPTR_ QGTSDGESLWSYS
                  .*:.*.**.*
BoxShade v3.31 C (beta, 970507) Output
AT1G12630.1     M N S S M A S A G L G S R R K D P V Y R G I R C R S G K W V S E I R E P R K T T R I W L G T Y P M A E M A A A A Y D V A
pt012166_POPTR_    - - - - M A T T S S S S K R H - P M Y R G I R S R S G K W V S E I R E P R K T T R I W L G T F P K P E M A A A A Y D V A
 
AT1G12630.1     A M A L K G R E A V L N F P G S V G S Y P V P E S T S A A D I R A A A A A A A A M K G C E E G E E E K K A K E K K S S S
pt012166_POPTR_    V L A L K G A D A V L N F P S S V G T Y P V P A S T S P T D I R N A A N A A A A L K K A E M S Y N E A L V E Q P R N - -
 
AT1G12630.1     S K S R A R E C H V D N D V G S S S W C G T E F M D E E E V L N M P N L L A N M A E G M M V A P P S W M G S R P S D D S
pt012166_POPTR_    - - - - - - D C A V G T F L A S G - - - G E E F V D E E A L F D M P N L L V D M A G G M L L S P P R I T P S - P S D D S
 
AT1G12630.1     P E N S N D E D L W G Y -
pt012166_POPTR_    Q G T S D G E S L W S Y S
 
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