fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009253 not found in 261aa AT5G52020.1 1st_not 0.460580912 II
Os010906 not found in 200aa AT1G12630.1 not_1st 0.423236514 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G12630.1     -----------------------------------------------MNSSMASAGLGSR
Os009253_Os02t0 MADLTEHPSPTAPPQVQTAGLPAAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEP
Os010906_Os03t0 -MDRDE-------------------------------------------SLGTQPLTGR-
                                                                 *  : .  *  

AT1G12630.1     R-----KDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGRE
Os009253_Os02t0 SPRSSGKHAFYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARALRGAD
Os010906_Os03t0 RVRADTRHPVYRGIRLRSGKWVSEIREPGKSSRIWLGTYPTPEMAAAAYDAAALALRGAD
                      :...***** ************ *: ******** .********.** **:* :

AT1G12630.1     AVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAREC
Os009253_Os02t0 AVLNFPGATASRPVPASASPADIRAAAAAAAAAAAHLERPH----GPTGTAYPATAAAEH
Os010906_Os03t0 AALNFPGTATSRPAPASGSPDDIRAAAAAAAAMIGSGHRGNQ-RAADASTSRAATAAPE-
                *.*****:. * *.* * *. ***********  .  .  .        :: . : * * 

AT1G12630.1     H-----------------------VDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMM
Os009253_Os02t0 HQQQQQQQYGSGSPAADDVSGYPPMEGGIGNDD-----FMDEEAIFELPQLLRNMAAGMM
Os010906_Os03t0 --------------AA--------VAAGAGDQK----RVVDEDDVFEMPRLLVSMAEGLM
                                        :  . *...     .:**: ::::*.** .** *:*

AT1G12630.1     VAPPSWMGSRPSDD-----SPENSNDED---LWGY---
Os009253_Os02t0 MSPPRL---SPTTS---DVSPE--PSEAGESLWSYRDP
Os010906_Os03t0 MSPPRL---SPSTDGVGGVSPEDDEDEDGMSLWNHS--
                ::**      *: .     ***   .*    **.:
BoxShade v3.31 C (beta, 970507) Output
AT1G12630.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N S S M A S A G L G S R
Os009253_Os02t0    M A D L T E H P S P T A P P Q V Q T A G L P A A A S P G P A S P H S P S E Q G D K T A P G A A T A S T M T T A S S G E P
Os010906_Os03t0    - M D R D E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L G T Q P L T G R -
 
AT1G12630.1     R - - - - - K D P V Y R G I R C R S G K W V S E I R E P R K T T R I W L G T Y P M A E M A A A A Y D V A A M A L K G R E
Os009253_Os02t0    S P R S S G K H A F Y R G I R C R S G K W V S E I R E P R K A R R I W L G T Y P T A E M A A A A Y D V A A R A L R G A D
Os010906_Os03t0    R V R A D T R H P V Y R G I R L R S G K W V S E I R E P G K S S R I W L G T Y P T P E M A A A A Y D A A A L A L R G A D
 
AT1G12630.1     A V L N F P G S V G S Y P V P E S T S A A D I R A A A A A A A A M K G C E E G E E E K K A K E K K S S S S K S R A R E C
Os009253_Os02t0    A V L N F P G A T A S R P V P A S A S P A D I R A A A A A A A A A A A H L E R P H - - - - G P T G T A Y P A T A A A E H
Os010906_Os03t0    A A L N F P G T A T S R P A P A S G S P D D I R A A A A A A A A M I G S G H R G N Q - R A A D A S T S R A A T A A P E -
 
AT1G12630.1     H - - - - - - - - - - - - - - - - - - - - - - - V D N D V G S S S W C G T E F M D E E E V L N M P N L L A N M A E G M M
Os009253_Os02t0    H Q Q Q Q Q Q Q Y G S G S P A A D D V S G Y P P M E G G I G N D D - - - - - F M D E E A I F E L P Q L L R N M A A G M M
Os010906_Os03t0    - - - - - - - - - - - - - - A A - - - - - - - - V A A G A G D Q K - - - - R V V D E D D V F E M P R L L V S M A E G L M
 
AT1G12630.1     V A P P S W M G S R P S D D - - - - - S P E N S N D E D - - - L W G Y - - -
Os009253_Os02t0    M S P P R L - - - S P T T S - - - D V S P E - - P S E A G E S L W S Y R D P
Os010906_Os03t0    M S P P R L - - - S P S T D G V G G V S P E D D E D E D G M S L W N H S - -
 
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