fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046959 not found in 165aa AT1G12630.1 1st_1st 0.477178423 Ia
Gm011299 not found in 156aa AT1G12630.1 not_1st 0.456431535 II
Gm002216 not found in 183aa AT1G12630.1 not_1st 0.443983402 II
Gm028667 not found in 205aa AT1G12630.1 not_1st 0.439834024 II
Gm052604 not found in 188aa AT2G36450.1 not_not 0.410788381 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G12630.1     -----------------MNSSMASAGL-GSRR-------KDPV------YRGIRCR-SGK
gm046959_Glyma1 ---------------------MASS---SSSK-------RHPL------YHGIRCR-GGK
gm028667_Glyma1 MDGNSFGNVPPPPIQVPDNLAISSSSSPTPTTSS-----PSPTPSGGFRYRGTRCR-SGK
gm002216_Glyma0 ---------------------MAPSSS-PSSK-------RHPL------FHGIRCR-GRK
gm052604_Glyma1 ---------------------MRSSNGTSSSRASNGNTGRHPV------YRGVRRRSSGK
gm011299_Glyma0 ---------------------MASSSSLSSSK-------RHPL------YHGIRCR-GGK
                                     : .:    .           *       ::* * * . *

AT1G12630.1     WVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGSYPVPESTSA
gm046959_Glyma1 WVTEIREPRKTNRIWLGTFLTPEMAAAAYDVAALALKGNEAVLNFPDSVGRYPVPASNSP
gm028667_Glyma1 WVSEIREPRKTNRIWLGTYPTAEMAAAAYDVAALALKGPDTPVNFPNSILSYPIPASLSS
gm002216_Glyma0 WVSEIREPRKASRIWLGTFPTPEMAAAAYDVAALALKGDGAVLNLPHSVSKYQMPLTNSP
gm052604_Glyma1 WVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPIPASSAA
gm011299_Glyma0 WVTEIREPRKTNRIWLGTFLTPEMAAAAYDVAALALKGGEAVLNFPDSVGGYPVPASKSP
                **:*****:*..******:  .**** ******:****  : :*:* *     :* : :.

AT1G12630.1     ADIRAAAAAAAAMKGCE--EGEEEKKAKEKKSSSSKSRARECHVDNDVGSSS---WCGTE
gm046959_Glyma1 SDIRFAAIAAAELMKP-----EANNNNNVN-ASTTNNAAVQ------SDSNDVLPSFETE
gm028667_Glyma1 TDIRAAAAAAAQARIVRA-PQESEETVNPD-----------------DGGQG-LSERREE
gm002216_Glyma0 ADIRSAASAAAAMIKAET-ETEATHNHNMNIASITDNEATY------TASTS---WFETD
gm052604_Glyma1 HDIQMAAALAATAVGAANDALEGSQGGNVSVSLAEEF----------SGGNL------NH
gm011299_Glyma0 ADIRTAAIAAAELMKP-----EASHNNN-------------------------------N
                 **: **  **          *  .  :                               .

AT1G12630.1     FMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY---
gm046959_Glyma1 FMDEEAIFSMPSLLVDMAGGMLLSPPR-MS-PPSDNE---------------
gm028667_Glyma1 YIDEDELLNMPNLLDEMARGMQVSPLR-ITSYSSDDSPGNSDGDNLWSYTL-
gm002216_Glyma0 FIDEEVIFGMPSLLVDMAGGMLLSPPR-MSPPPSDNSLEKQNGETLWSYF--
gm052604_Glyma1 FVDEDLIFDMPNILVNMAEGMLLSPPR-FDNFAATDYEYMDEDPNLWGFPNY
gm011299_Glyma0 FMDEEAIFSMPSLLVDMAGGMLLSPPR-MS-PPSDDSTQSYVGETLWNF---
                ::**: ::.**.:* :** ** ::*   :   .: :
BoxShade v3.31 C (beta, 970507) Output
AT1G12630.1     - - - - - - - - - - - - - - - - - M N S S M A S A G L - G S R R - - - - - - - K D P V - - - - - - Y R G I R C R - S G K
gm046959_Glyma1    - - - - - - - - - - - - - - - - - - - - - M A S S - - - S S S K - - - - - - - R H P L - - - - - - Y H G I R C R - G G K
gm028667_Glyma1    M D G N S F G N V P P P P I Q V P D N L A I S S S S S P T P T T S S - - - - - P S P T P S G G F R Y R G T R C R - S G K
gm002216_Glyma0    - - - - - - - - - - - - - - - - - - - - - M A P S S S - P S S K - - - - - - - R H P L - - - - - - F H G I R C R - G R K
gm052604_Glyma1    - - - - - - - - - - - - - - - - - - - - - M R S S N G T S S S R A S N G N T G R H P V - - - - - - Y R G V R R R S S G K
gm011299_Glyma0    - - - - - - - - - - - - - - - - - - - - - M A S S S S L S S S K - - - - - - - R H P L - - - - - - Y H G I R C R - G G K
 
AT1G12630.1     W V S E I R E P R K T T R I W L G T Y P M A E M A A A A Y D V A A M A L K G R E A V L N F P G S V G S Y P V P E S T S A
gm046959_Glyma1    W V T E I R E P R K T N R I W L G T F L T P E M A A A A Y D V A A L A L K G N E A V L N F P D S V G R Y P V P A S N S P
gm028667_Glyma1    W V S E I R E P R K T N R I W L G T Y P T A E M A A A A Y D V A A L A L K G P D T P V N F P N S I L S Y P I P A S L S S
gm002216_Glyma0    W V S E I R E P R K A S R I W L G T F P T P E M A A A A Y D V A A L A L K G D G A V L N L P H S V S K Y Q M P L T N S P
gm052604_Glyma1    W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P I P A S S A A
gm011299_Glyma0    W V T E I R E P R K T N R I W L G T F L T P E M A A A A Y D V A A L A L K G G E A V L N F P D S V G G Y P V P A S K S P
 
AT1G12630.1     A D I R A A A A A A A A M K G C E - - E G E E E K K A K E K K S S S S K S R A R E C H V D N D V G S S S - - - W C G T E
gm046959_Glyma1    S D I R F A A I A A A E L M K P - - - - - E A N N N N N V N - A S T T N N A A V Q - - - - - - S D S N D V L P S F E T E
gm028667_Glyma1    T D I R A A A A A A A Q A R I V R A - P Q E S E E T V N P D - - - - - - - - - - - - - - - - - D G G Q G - L S E R R E E
gm002216_Glyma0    A D I R S A A S A A A A M I K A E T - E T E A T H N H N M N I A S I T D N E A T Y - - - - - - T A S T S - - - W F E T D
gm052604_Glyma1    H D I Q M A A A L A A T A V G A A N D A L E G S Q G G N V S V S L A E E F - - - - - - - - - - S G G N L - - - - - - N H
gm011299_Glyma0    A D I R T A A I A A A E L M K P - - - - - E A S H N N N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N
 
AT1G12630.1     F M D E E E V L N M P N L L A N M A E G M M V A P P S W M G S R P S D D S P E N S N D E D L W G Y - - -
gm046959_Glyma1    F M D E E A I F S M P S L L V D M A G G M L L S P P R - M S - P P S D N E - - - - - - - - - - - - - - -
gm028667_Glyma1    Y I D E D E L L N M P N L L D E M A R G M Q V S P L R - I T S Y S S D D S P G N S D G D N L W S Y T L -
gm002216_Glyma0    F I D E E V I F G M P S L L V D M A G G M L L S P P R - M S P P P S D N S L E K Q N G E T L W S Y F - -
gm052604_Glyma1    F V D E D L I F D M P N I L V N M A E G M L L S P P R - F D N F A A T D Y E Y M D E D P N L W G F P N Y
gm011299_Glyma0    F M D E E A I F S M P S L L V D M A G G M L L S P P R - M S - P P S D D S T Q S Y V G E T L W N F - - -
 
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