fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027458 not found in 427aa AT1G12980.1 1st_1st 0.161048689 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G12980.1     MEKALRNFTESTHSPDPNPLTKFFTEPTA-SPVSRNRKLSSKDTTVTIAGAGSSTTRYRG
Sb027458_Sorbi1 ----------IPKEPDP-P----FHAPRARDPCTRARTARAPEPSAPAAAS---------
                           .:.*** *    *  * * .* :* *.  : :.:.. *.:         

AT1G12980.1     VRRRPWGRYAAEIRDPMSKERRWLGTFD-TAEQA-------ACAYDSAARAFRGAKARTN
Sb027458_Sorbi1 -RRDGDGRRGHDL-----QERR--GVWDHVLEQALRHHRVLAVPVDARERAGKD------
                 **   ** . ::     :***  *.:* . ***       * . *:  ** :.      

AT1G12980.1     FTYPTAVIMPEPRFSFSNKKSSPSARCP----------LPSLPLDSSTQNFYGAPAAQRI
Sb027458_Sorbi1 ----------EPLLHYRHQR---SCGCPGVVGAGRGQAAPAIAA--------GARTRKRV
                          ** : : :::   *. **           *::.         ** : :*:

AT1G12980.1     YNTQSIFL------------------------------RDASCSS----RKTTPYNNSFN
Sb027458_Sorbi1 EVVQRVLQQTGVRGLAPQDAVPVVHVLVHRYDVGVGGDREGPCDGRVIRRRRRRRRSGGN
                  .* ::                               *:..*..    *:    ... *

AT1G12980.1     GSSSSYSASKTACVSYSE---NENNESFFPEESSDTGLLQEVVQEFLKKNRGVPPSP---
Sb027458_Sorbi1 GMSVSVPVSVSCLVKQAAAVVGGAHDEVVQQEGVDVDRVRDRDRRRLRR----APRPVAR
                * * * ..* :. *. :    .  ::... :*. *.. :::  :. *::    .* *   

AT1G12980.1     ---------------------------------PTPPPVTSHHDNSGYFSNLTIYSENMV
Sb027458_Sorbi1 GGVAGEVGARLVAAHGARGDVVGAGGLLSGVEGAEPPPLLGHG------------VADLR
                                                 . ***: .*               :: 

AT1G12980.1     QE----------TKETLSSKLD----------RYGNFQANDDGVRAVADGGLSLGSN-EW
Sb027458_Sorbi1 REPAPRPAPHAAVPRALHGQVDVPVPVLHRGRRRG----------TLAPVGVGMGVEVRV
                :*          . .:* .::*          * *          ::*  *:.:* : . 

AT1G12980.1     GYQEMLMYGTQLGCTCRRS---------WG-----------
Sb027458_Sorbi1 GH---VLHGLSLE---RRAPQANGDRSRWGSVARRLLASED
                *:   :::* .*    **:         **
BoxShade v3.31 C (beta, 970507) Output
AT1G12980.1     M E K A L R N F T E S T H S P D P N P L T K F F T E P T A - S P V S R N R K L S S K D T T V T I A G A G S S T T R Y R G
Sb027458_Sorbi1    - - - - - - - - - - I P K E P D P - P - - - - F H A P R A R D P C T R A R T A R A P E P S A P A A A S - - - - - - - - -
 
AT1G12980.1     V R R R P W G R Y A A E I R D P M S K E R R W L G T F D - T A E Q A - - - - - - - A C A Y D S A A R A F R G A K A R T N
Sb027458_Sorbi1    - R R D G D G R R G H D L - - - - - Q E R R - - G V W D H V L E Q A L R H H R V L A V P V D A R E R A G K D - - - - - -
 
AT1G12980.1     F T Y P T A V I M P E P R F S F S N K K S S P S A R C P - - - - - - - - - - L P S L P L D S S T Q N F Y G A P A A Q R I
Sb027458_Sorbi1    - - - - - - - - - - E P L L H Y R H Q R - - - S C G C P G V V G A G R G Q A A P A I A A - - - - - - - - G A R T R K R V
 
AT1G12980.1     Y N T Q S I F L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R D A S C S S - - - - R K T T P Y N N S F N
Sb027458_Sorbi1    E V V Q R V L Q Q T G V R G L A P Q D A V P V V H V L V H R Y D V G V G G D R E G P C D G R V I R R R R R R R R S G G N
 
AT1G12980.1     G S S S S Y S A S K T A C V S Y S E - - - N E N N E S F F P E E S S D T G L L Q E V V Q E F L K K N R G V P P S P - - -
Sb027458_Sorbi1    G M S V S V P V S V S C L V K Q A A A V V G G A H D E V V Q Q E G V D V D R V R D R D R R R L R R - - - - A P R P V A R
 
AT1G12980.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P T P P P V T S H H D N S G Y F S N L T I Y S E N M V
Sb027458_Sorbi1    G G V A G E V G A R L V A A H G A R G D V V G A G G L L S G V E G A E P P P L L G H G - - - - - - - - - - - - V A D L R
 
AT1G12980.1     Q E - - - - - - - - - - T K E T L S S K L D - - - - - - - - - - R Y G N F Q A N D D G V R A V A D G G L S L G S N - E W
Sb027458_Sorbi1    R E P A P R P A P H A A V P R A L H G Q V D V P V P V L H R G R R R G - - - - - - - - - - T L A P V G V G M G V E V R V
 
AT1G12980.1     G Y Q E M L M Y G T Q L G C T C R R S - - - - - - - - - W G - - - - - - - - - - -
Sb027458_Sorbi1    G H - - - V L H G L S L E - - - R R A P Q A N G D R S R W G S V A R R L L A S E D
 
0