fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042964 PIQMVRLFGVNIFNV in 325/369 AT1G25560.1 1st_not 0.610852713 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13260.1     MESSSVDESTTST--GSICETP-AITPA------KKSSVGNLYRMGSGSSVVLDSENGVE
pt042964_POPTR_ MDGSCVDESTTSSTDNSISITPTSLTPSPPPATTTKSPPESLCRVGSGNSVILDLELGVE
                *:.*.*******:  .**. ** ::**:      .**.  .* *:***.**:** * ***

AT1G13260.1     AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDA
pt042964_POPTR_ AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDTAAQRFRGRDA
                *************************************************.*.:*** ***

AT1G13260.1     VTNFKDVKMDED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRR---NG-NGNMTR
pt042964_POPTR_ VTNFKQVNETEDDEIEAAFLITHSKAEIVDMLRKHTYSDELEQSKRNQRSNNGVNGKQYK
                *****:*:  **   *. ** :***:***********.:*******.:   ** **:  :

AT1G13260.1     TLLTSGLSNDGVSTTG--FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPS-SNV
pt042964_POPTR_ NTANYG-SNSYDHGCGRVLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSC
                .  . * **.     *  ::: * *********************:******** * *. 

AT1G13260.1     SVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQD
pt042964_POPTR_ STKGVLLNLEDMSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVCFQRSTGPD
                *.******:**:.******************************.*:***:*.*.**.* *

AT1G13260.1     QQLYIGWKSRSGSD----LDAGRVLRLFGVNI-SPESSRNDVVGNKRVNDTEMLSL--VC
pt042964_POPTR_ KQLYIDWKARSGSNQVQPVQPIQMVRLFGVNIFNVPGMENGCNGKRSVREMELLSLDHQY
                :****.**:****:    ::. :::******* .  . .*.  *:: *.: *:***    

AT1G13260.1     SKKQRIFHAS
pt042964_POPTR_ SKKQRIIGAL
                ******: *
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     M E S S S V D E S T T S T - - G S I C E T P - A I T P A - - - - - - K K S S V G N L Y R M G S G S S V V L D S E N G V E
pt042964_POPTR_    M D G S C V D E S T T S S T D N S I S I T P T S L T P S P P P A T T T K S P P E S L C R V G S G N S V I L D L E L G V E
 
AT1G13260.1     A E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A V H R F R R R D A
pt042964_POPTR_    A E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D T A A Q R F R G R D A
 
AT1G13260.1     V T N F K D V K M D E D - - - E V D F L N S H S K S E I V D M L R K H T Y N E E L E Q S K R R R - - - N G - N G N M T R
pt042964_POPTR_    V T N F K Q V N E T E D D E I E A A F L I T H S K A E I V D M L R K H T Y S D E L E Q S K R N Q R S N N G V N G K Q Y K
 
AT1G13260.1     T L L T S G L S N D G V S T T G - - F R S A E A L F E K A V T P S D V G K L N R L V I P K H H A E K H F P L P S - S N V
pt042964_POPTR_    N T A N Y G - S N S Y D H G C G R V L K A R E Q L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S C
 
AT1G13260.1     S V K G V L L N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V S F S R S N G Q D
pt042964_POPTR_    S T K G V L L N L E D M S G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K S L K A G D I V C F Q R S T G P D
 
AT1G13260.1     Q Q L Y I G W K S R S G S D - - - - L D A G R V L R L F G V N I - S P E S S R N D V V G N K R V N D T E M L S L - - V C
pt042964_POPTR_    K Q L Y I D W K A R S G S N Q V Q P V Q P I Q M V R L F G V N I F N V P G M E N G C N G K R S V R E M E L L S L D H Q Y
 
AT1G13260.1     S K K Q R I F H A S
pt042964_POPTR_    S K K Q R I I G A L
 
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