fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035978 PVQMVRLFGVNIFNV in 357/401 AT1G25560.1 not_not 0.610852713 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13260.1     ----------------------------------MESSSVDESTTSTG--SICETPAITP
pt035978_POPTR_ MPLSLVNKNTSSISLSFSFSLAPPSFTTTTRKKNMDGSCIDESTTSSADNSISITPTSLP
                                                  *:.*.:******:.  **. **:  *

AT1G13260.1     -------AKKSSVGNLYRMGSG-SSVVLDSENGVEAESRKLPSSKYKGVVPQPNGRWGAQ
pt035978_POPTR_ PFPPTATTTKSPPESLCRVRSGNSSVILDSESGVEAESRKLPSSKYKGVVPQPNGRWGAQ
                       :.**.  .* *: ** ***:****.****************************

AT1G13260.1     IYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDED---EVDFLNSHSK
pt035978_POPTR_ IYEKHQRVWLGTFNEENEAARAYDIAAQRFRGRDAVTNFKQVNETEDDEIEAAFLNAHSK
                ****************:*******:*.:*** ********:*:  **   *. ***:***

AT1G13260.1     SEIVDMLRKHTYNEELEQSKR--RRNGNGNMTRTLLTSGLSND----GVSTTGFRSAEAL
pt035978_POPTR_ AEIVDMLRKHTYSDELEQSKRNHRSNNGGNGKQYKNTANYENNSYDHGCGRV-LKAREQL
                :***********.:*******  * *..** .:   *:. .*:    * . . ::: * *

AT1G13260.1     FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPS-SNVSVKGVLLNFEDVNGKVWRFRYSYWN
pt035978_POPTR_ FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLLNLEDVSGKVWRFRYSYWN
                ********************:******** * *. *.******:***.************

AT1G13260.1     SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSD-LDAGRVLRLF
pt035978_POPTR_ SSQSYVLTKGWSRFVKEKNLKAGDIVCFQRSTGPDNQLYIDWKARCGSNQVQPVQMVRLF
                ********************:***:*.*.**.* *:****.**:*.**: ::. :::***

AT1G13260.1     GVNI-SPESSRNDVVGNKRVNDTEMLSL--VCSKKQRIFHAS
pt035978_POPTR_ GVNIFNVPGMENGCDGKRSIRDMELLSIDRQYSKKQRIVGAL
                **** .  . .*.  *:: :.* *:**:    ******. *
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S S S V D E S T T S T G - - S I C E T P A I T P
pt035978_POPTR_    M P L S L V N K N T S S I S L S F S F S L A P P S F T T T T R K K N M D G S C I D E S T T S S A D N S I S I T P T S L P
 
AT1G13260.1     - - - - - - - A K K S S V G N L Y R M G S G - S S V V L D S E N G V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q
pt035978_POPTR_    P F P P T A T T T K S P P E S L C R V R S G N S S V I L D S E S G V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q
 
AT1G13260.1     I Y E K H Q R V W L G T F N E E D E A A R A Y D V A V H R F R R R D A V T N F K D V K M D E D - - - E V D F L N S H S K
pt035978_POPTR_    I Y E K H Q R V W L G T F N E E N E A A R A Y D I A A Q R F R G R D A V T N F K Q V N E T E D D E I E A A F L N A H S K
 
AT1G13260.1     S E I V D M L R K H T Y N E E L E Q S K R - - R R N G N G N M T R T L L T S G L S N D - - - - G V S T T G F R S A E A L
pt035978_POPTR_    A E I V D M L R K H T Y S D E L E Q S K R N H R S N N G G N G K Q Y K N T A N Y E N N S Y D H G C G R V - L K A R E Q L
 
AT1G13260.1     F E K A V T P S D V G K L N R L V I P K H H A E K H F P L P S - S N V S V K G V L L N F E D V N G K V W R F R Y S Y W N
pt035978_POPTR_    F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S N S T K G V L L N L E D V S G K V W R F R Y S Y W N
 
AT1G13260.1     S S Q S Y V L T K G W S R F V K E K N L R A G D V V S F S R S N G Q D Q Q L Y I G W K S R S G S D - L D A G R V L R L F
pt035978_POPTR_    S S Q S Y V L T K G W S R F V K E K N L K A G D I V C F Q R S T G P D N Q L Y I D W K A R C G S N Q V Q P V Q M V R L F
 
AT1G13260.1     G V N I - S P E S S R N D V V G N K R V N D T E M L S L - - V C S K K Q R I F H A S
pt035978_POPTR_    G V N I F N V P G M E N G C D G K R S I R D M E L L S I D R Q Y S K K Q R I V G A L
 
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