fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003376 PVKAVRLFGVDLLTA in 347/393 AT1G68840.1 1st_not 0.482170542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13260.1     MESSS--VDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLD-SENGVEAES---
Os003376_Os01t0 MDSSSCLVDD-TNSGGSSTDKLRALAAAAAETAPLERMGSGASAVVDAAEPGAEADSGSG
                *:***  **: *.* **  :.    .*  :... * *****:*.*:* :* *.**:*   

AT1G13260.1     ---------------RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAY
Os003376_Os01t0 GRVCGGGGGGAGGAGGKLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAY
                                ******:*****************:*********  **:*****

AT1G13260.1     DVAVHRFRRRDAVTNFKDV-KMDED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRR
Os003376_Os01t0 DVAAQRFRGRDAVTNFRPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRT
                ***.:*** *******: : : * *   *: ** ::**:*:********* :** **** 

AT1G13260.1     RNGNGNMTRTLLTSGLSNDGVST--TGFRSAEA---LFEKAVTPSDVGKLNRLVIPKHHA
Os003376_Os01t0 FAASTPSAAT-TTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHA
                  ..   : *  *:.***. :*:  : * .* *   **:*:****************:**

AT1G13260.1     EKHFP--LPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRA
Os003376_Os01t0 EKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHA
                *****  ***:. . *********. ******************************.*:*

AT1G13260.1     GDVVSFSR---SNGQDQQLYIGWK--SRSGSDLDAG---------RVLRLFGVN-ISPES
Os003376_Os01t0 GDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAPA
                ****.* *   * *:* :*:*. *    :*: * :          :.:*****: ::. :

AT1G13260.1     SRNDVVGNKRVND---TEMLSLVCSKKQRIFHAS-
Os003376_Os01t0 PVEQMAGCKRARDLAATTPPQAAAFKKQCIELALV
                . :::.* **..*   *   . .. *** *  *
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     M E S S S - - V D E S T T S T G S I C E T P A I T P A K K S S V G N L Y R M G S G S S V V L D - S E N G V E A E S - - -
Os003376_Os01t0    M D S S S C L V D D - T N S G G S S T D K L R A L A A A A A E T A P L E R M G S G A S A V V D A A E P G A E A D S G S G
 
AT1G13260.1     - - - - - - - - - - - - - - - R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y
Os003376_Os01t0    G R V C G G G G G G A G G A G G K L P S S K F K G V V P Q P N G R W G A Q I Y E R H Q R V W L G T F A G E D D A A R A Y
 
AT1G13260.1     D V A V H R F R R R D A V T N F K D V - K M D E D - - - E V D F L N S H S K S E I V D M L R K H T Y N E E L E Q S K R R
Os003376_Os01t0    D V A A Q R F R G R D A V T N F R P L A E A D P D A A A E L R F L A T R S K A E V V D M L R K H T Y F D E L A Q S K R T
 
AT1G13260.1     R N G N G N M T R T L L T S G L S N D G V S T - - T G F R S A E A - - - L F E K A V T P S D V G K L N R L V I P K H H A
Os003376_Os01t0    F A A S T P S A A T - T T A S L S N G H L S S P R S P F A P A A A R D H L F D K T V T P S D V G K L N R L V I P K Q H A
 
AT1G13260.1     E K H F P - - L P S S N V S V K G V L L N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A
Os003376_Os01t0    E K H F P L Q L P S A G G E S K G V L L N F E D A A G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K G L H A
 
AT1G13260.1     G D V V S F S R - - - S N G Q D Q Q L Y I G W K - - S R S G S D L D A G - - - - - - - - - R V L R L F G V N - I S P E S
Os003376_Os01t0    G D V V G F Y R S A A S A G D D G K L F I D C K L V R S T G A A L A S P A D Q P A P S P V K A V R L F G V D L L T A P A
 
AT1G13260.1     S R N D V V G N K R V N D - - - T E M L S L V C S K K Q R I F H A S -
Os003376_Os01t0    P V E Q M A G C K R A R D L A A T T P P Q A A A F K K Q C I E L A L V
 
0