fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000363 ARVVVKLFGVDIAGD in 305/317 AT1G68840.1 not_not 0.441860465 III
Os000364 EPRVVRLFGVDIAGG in 320/365 AT1G25560.1 not_not 0.438759689 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13260.1     --MESSSVDESTTS-TGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSEN---------
Os000364_Os01t0 ----MGVVSFSSTS-SG------------------------ASTATTESGG--------A
Os000363_Os01t0 MEQEAAMVVFSCNSGSG------------------------GSSSTTDSKQEEEEEEELA
                     . *  * .* :*                        .*: . :*           

AT1G13260.1     ---------GVEAESRKLP-----------------------SSKYKGVVPQPNGRWGAQ
Os000364_Os01t0 VRMSPEPVVAVAAAAQQLPVVKGVDSADEVVTSRPAAAAAQQSSRYKGVVPQPNGRWGAQ
Os000363_Os01t0 AMEEDELIHVVQAAELRLP--------SSTTATRP-------SSRYKGVVPQPNGRWGAQ
                          * *   :**                       **:***************

AT1G13260.1     IYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVK--MDEDEVDFLNSHSKS
Os000364_Os01t0 IYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAATNFPGAA--ASAAELAFLAAHSKA
Os000363_Os01t0 IYERHARVWLGTFPDEEAAARAYDVAALRFRGRDAVTNRAPAAEGASAGELAFLAAHSKA
                ***:* ******* :*: ********. *:* ***.**   .    .  *: ** :***:

AT1G13260.1     EIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTP
Os000364_Os01t0 EIVDMLRKHTYADELRQGLRRGRGMGARAQ-------------PTPSWAREPLFEKAVTP
Os000363_Os01t0 EVVDMLRKHTYDDELQQGLRR----GSRAQ-------------PTPRWAREPLFEKAVTP
                *:********* :**.*. **    *  ::             .*   : *.********

AT1G13260.1     SDVGKLNRLVIPKHHAEKH--FPL---PSSNVS-----VKGVLLNFEDVNGKVWRFRYSY
Os000364_Os01t0 SDVGKLNRLVVPKQHAEKH--FPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSY
Os000363_Os01t0 SDVGKLNRLVVPKQQAERHFPFPLRR-HSSDAA-----GKGVLLNFEDGDGKVWRFRYSY
                **********:**::**:*  ***    **: :      ********* :**********

AT1G13260.1     WNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSN---GQDQQLYIGWKSRSGSDLDAG--
Os000364_Os01t0 WNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRS--AYGPDKLLFIDCKK---NNAAAATT
Os000363_Os01t0 WNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLA----
                *****************:**.**.**.: ****    * :: * *. *.   .:      

AT1G13260.1     ---------------RVLRLFGVNISPESSRNDVVGNKRVNDTEM-LSLVCSKKQRIFHA
Os000364_Os01t0 TCAGDERPTTSGAEPRVVRLFGVDIAGGDCR------KRERAVEMGQEVFLLKRQCVVHQ
Os000363_Os01t0 TVDDDARV--------VVKLFGVDIAGDKTR-----------------------------
                                *::****:*:  . *                             

AT1G13260.1     S---------
Os000364_Os01t0 RTPALGALLL
Os000363_Os01t0 ----------
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     - - M E S S S V D E S T T S - T G S I C E T P A I T P A K K S S V G N L Y R M G S G S S V V L D S E N - - - - - - - - -
Os000364_Os01t0    - - - - M G V V S F S S T S - S G - - - - - - - - - - - - - - - - - - - - - - - - A S T A T T E S G G - - - - - - - - A
Os000363_Os01t0    M E Q E A A M V V F S C N S G S G - - - - - - - - - - - - - - - - - - - - - - - - G S S S T T D S K Q E E E E E E E L A
 
AT1G13260.1     - - - - - - - - - G V E A E S R K L P - - - - - - - - - - - - - - - - - - - - - - - S S K Y K G V V P Q P N G R W G A Q
Os000364_Os01t0    V R M S P E P V V A V A A A A Q Q L P V V K G V D S A D E V V T S R P A A A A A Q Q S S R Y K G V V P Q P N G R W G A Q
Os000363_Os01t0    A M E E D E L I H V V Q A A E L R L P - - - - - - - - S S T T A T R P - - - - - - - S S R Y K G V V P Q P N G R W G A Q
 
AT1G13260.1     I Y E K H Q R V W L G T F N E E D E A A R A Y D V A V H R F R R R D A V T N F K D V K - - M D E D E V D F L N S H S K S
Os000364_Os01t0    I Y E R H A R V W L G T F P D E E A A A R A Y D V A A L R Y R G R D A A T N F P G A A - - A S A A E L A F L A A H S K A
Os000363_Os01t0    I Y E R H A R V W L G T F P D E E A A A R A Y D V A A L R F R G R D A V T N R A P A A E G A S A G E L A F L A A H S K A
 
AT1G13260.1     E I V D M L R K H T Y N E E L E Q S K R R R N G N G N M T R T L L T S G L S N D G V S T T G F R S A E A L F E K A V T P
Os000364_Os01t0    E I V D M L R K H T Y A D E L R Q G L R R G R G M G A R A Q - - - - - - - - - - - - - P T P S W A R E P L F E K A V T P
Os000363_Os01t0    E V V D M L R K H T Y D D E L Q Q G L R R - - - - G S R A Q - - - - - - - - - - - - - P T P R W A R E P L F E K A V T P
 
AT1G13260.1     S D V G K L N R L V I P K H H A E K H - - F P L - - - P S S N V S - - - - - V K G V L L N F E D V N G K V W R F R Y S Y
Os000364_Os01t0    S D V G K L N R L V V P K Q H A E K H - - F P L R R A A S S D S A S A A A T G K G V L L N F E D G E G K V W R F R Y S Y
Os000363_Os01t0    S D V G K L N R L V V P K Q Q A E R H F P F P L R R - H S S D A A - - - - - G K G V L L N F E D G D G K V W R F R Y S Y
 
AT1G13260.1     W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V S F S R S N - - - G Q D Q Q L Y I G W K S R S G S D L D A G - -
Os000364_Os01t0    W N S S Q S Y V L T K G W S R F V R E K G L R A G D T I V F S R S - - A Y G P D K L L F I D C K K - - - N N A A A A T T
Os000363_Os01t0    W N S S Q S Y V L T K G W S R F V R E K G L R P G D T V A F S R S A A A W G T E K H L L I D C K K M E R N N L A - - - -
 
AT1G13260.1     - - - - - - - - - - - - - - - R V L R L F G V N I S P E S S R N D V V G N K R V N D T E M - L S L V C S K K Q R I F H A
Os000364_Os01t0    T C A G D E R P T T S G A E P R V V R L F G V D I A G G D C R - - - - - - K R E R A V E M G Q E V F L L K R Q C V V H Q
Os000363_Os01t0    T V D D D A R V - - - - - - - - V V K L F G V D I A G D K T R - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G13260.1     S - - - - - - - - -
Os000364_Os01t0    R T P A L G A L L L
Os000363_Os01t0    - - - - - - - - - -
 
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