fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032995 PVKAVRLFGVDLLTT in 374/428 AT1G25560.1 1st_not 0.480620155 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13260.1     ----------------------MESSS--VDESTTSTGSICETPAITPAKKSSVGNLYRM
Sb032995_Sorbi1 PPLLELNLPQSISLSRGGCSDRMDSTSCLLDDASSGASTGNKNPAPAPAAATGGKPLQRV
                                      *:*:*  :*::::.:.:  :.** :**  :.   * *:

AT1G13260.1     GSGSSVVLD-SENGVEAES------------------RKLPSSKYKGVVPQPNGRWGAQI
Sb032995_Sorbi1 GSGASAVMDAAEPGAEADSGSGGAGRATGGCGVVSGNGKLPSSKYKGVVPQPNGRWGAQI
                ***:*.*:* :* *.**:*                   **********************

AT1G13260.1     YEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDED----EVDFLNSHSK
Sb032995_Sorbi1 YERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDPEAAVELRFLASRTK
                **:*********. * *********.:*** *******: :  .:     *: ** *::*

AT1G13260.1     SEIVDMLRKHTYNEELEQSKR-------------RRNGNGNMTRTLLTSGLSNDGVSTTG
Sb032995_Sorbi1 AEVVDMLRKHTYGEELAQNRRAFAAASPAASPPPAKNNNPAASSS-----------SPTA
                :*:*********.*** *.:*              :*.*   : :           *.*.

AT1G13260.1     FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFP--LPSSNVSV-----KGVLLNFEDV
Sb032995_Sorbi1 VTAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAVVGGECKGVLLNFEDA
                . : * **:*:****************:*******  **:: .:*     *********.

AT1G13260.1     NGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG
Sb032995_Sorbi1 TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGKQQFFIDCKLRPK
                .******************************.*:***.*.* ** * .**::*. * *. 

AT1G13260.1     SDLDAG---------------RVLRLFGVNI------------SPESSRNDVVGNKRVND
Sb032995_Sorbi1 TTTTAASFVNATTTTAAPSPVKAVRLFGVDLLTTPRPGPAVVAAPEQEE-IAMANKRARD
                :   *.               :.:*****::            :**...  .:.***..*

AT1G13260.1     --TEMLSLVCSKKQRIFHAS
Sb032995_Sorbi1 AIARVLQYTWFSRSNAYTSR
                  :.:*. .  .:.. : :
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     - - - - - - - - - - - - - - - - - - - - - - M E S S S - - V D E S T T S T G S I C E T P A I T P A K K S S V G N L Y R M
Sb032995_Sorbi1    P P L L E L N L P Q S I S L S R G G C S D R M D S T S C L L D D A S S G A S T G N K N P A P A P A A A T G G K P L Q R V
 
AT1G13260.1     G S G S S V V L D - S E N G V E A E S - - - - - - - - - - - - - - - - - - R K L P S S K Y K G V V P Q P N G R W G A Q I
Sb032995_Sorbi1    G S G A S A V M D A A E P G A E A D S G S G G A G R A T G G C G V V S G N G K L P S S K Y K G V V P Q P N G R W G A Q I
 
AT1G13260.1     Y E K H Q R V W L G T F N E E D E A A R A Y D V A V H R F R R R D A V T N F K D V K M D E D - - - - E V D F L N S H S K
Sb032995_Sorbi1    Y E R H Q R V W L G T F T G E A E A A R A Y D V A A Q R F R G R D A V T N F R P L A E S D P E A A V E L R F L A S R T K
 
AT1G13260.1     S E I V D M L R K H T Y N E E L E Q S K R - - - - - - - - - - - - - R R N G N G N M T R T L L T S G L S N D G V S T T G
Sb032995_Sorbi1    A E V V D M L R K H T Y G E E L A Q N R R A F A A A S P A A S P P P A K N N N P A A S S S - - - - - - - - - - - S P T A
 
AT1G13260.1     F R S A E A L F E K A V T P S D V G K L N R L V I P K H H A E K H F P - - L P S S N V S V - - - - - K G V L L N F E D V
Sb032995_Sorbi1    V T A R E H L F D K T V T P S D V G K L N R L V I P K Q H A E K H F P L Q L P A A A A A V V G G E C K G V L L N F E D A
 
AT1G13260.1     N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V S F S R S N G Q D Q Q L Y I G W K S R S G
Sb032995_Sorbi1    T G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K G L H A G D A V G F Y R S A G G K Q Q F F I D C K L R P K
 
AT1G13260.1     S D L D A G - - - - - - - - - - - - - - - R V L R L F G V N I - - - - - - - - - - - - S P E S S R N D V V G N K R V N D
Sb032995_Sorbi1    T T T T A A S F V N A T T T T A A P S P V K A V R L F G V D L L T T P R P G P A V V A A P E Q E E - I A M A N K R A R D
 
AT1G13260.1     - - T E M L S L V C S K K Q R I F H A S
Sb032995_Sorbi1    A I A R V L Q Y T W F S R S N A Y T S R
 
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