fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13260.1 AGRVLRLFGVNISPE at 302/344 in AT1G13260.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025645 not found in 538aa AT1G25560.1 not_not 0.479069767 III
Sb024795 EARVVRLFGVDIAGD in 418/557 AT1G68840.1 not_not 0.426356589 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13260.1     ------------------------------------------------MESSS--VDEST
Sb024795_Sorbi1 RRILSITGRRAAAGSRVPKQKSKKPKAARLQGAARAVALAHLIMGIESMSPTAAPAEDSS
Sb025645_Sorbi1 -----------------PASSS----------------------GALKMDSASSLVDDTS
                                                                *..::  .::::

AT1G13260.1     TSTG-------SICETPAITPAKKSSVGNLYRMGSGSSVV-LD-S---ENGVEAESR---
Sb024795_Sorbi1 SSSSRFSAASTATTESGAAQPRAASAAP-----GGGAVVVGRDASLADEQAVTSQPLAAS
Sb025645_Sorbi1 SGSGG--GGGASTDKLRALAVAAAASGPPLERMGSGASAV-LDAA---EPGAEADSAAAA
                :.:.       :  :  *      ::       *.*: .*  * :   * .. ::.    

AT1G13260.1     ---------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRF
Sb024795_Sorbi1 TAAAVAQG----SSRFKGVVPQPNGRWGAQIYERHARVWLGTFADEEAAARAYDVAALRY
Sb025645_Sorbi1 APGAVGVGGKLPSSRYKGVVPQPNGRWGAQIYERHQRVWLGTFAGEADAARAYDVAAQRF
                            **::*****************:* *******  *  ********. *:

AT1G13260.1     RRRDAVTNFKDVKMDED-----EVDFLNSHSKSEIVDMLRKHTYNEELEQSKR----RRN
Sb024795_Sorbi1 RGREAATNFPGAGASAP-----ELTFLAAHSKAEIVDMLRKHTYADELRQGLR----RGR
Sb025645_Sorbi1 RGRDAVTNFRPLA-DADPDAAAELRFLASRSKAEVVDMLRKHTYFDELAQNKRAFAAAAA
                * *:*.***     .       *: ** ::**:*:********* :** *. *       

AT1G13260.1     GNGNMTRTLLTSGLSNDGVSTTGFRSA------EALFEKAVTPSDVGKLNRLVIPKHHAE
Sb024795_Sorbi1 GMGARAQ-------------------PTPAWARSLLFEKAVTPSDVGKLNRLVVPKQHAE
Sb025645_Sorbi1 AAASSAATTTASSLANNNNNHSSLASPSPATAREHLFDKTVTPSDVGKLNRLVIPKQHAE
                . .  :                    .      . **:*:*************:**:***

AT1G13260.1     KHFP---LPSSNVSV----KGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEK
Sb024795_Sorbi1 KHFPLKRAPEASAAAATTGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREK
Sb025645_Sorbi1 KHFPL-QLPSAGGES----KGVLLNLEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEK
                ****    *.:.       ******:**  ***************************:**

AT1G13260.1     NLRAGDVVSFSRSN----GQDQQLYIGWKSRSGSDLDAG---------------------
Sb024795_Sorbi1 GLRAGDTIVFSHST---YSSEKQLFIDCKKTKTTTVATT--------DGAPVPAPAEKKP
Sb025645_Sorbi1 GLQAGDVVGFYRSSAVGAGADTKLFIDCKLRPNSVATASTTTGPAVGSSPPAPAPA---P
                .*:***.: * :*.    . : :*:*. *    :   :                      

AT1G13260.1     ---RVLRLFGVNI--SPESSRND-----VVGN-KRVNDTEML------SLVCSKKQRIFH
Sb024795_Sorbi1 SEARVVRLFGVDI--------------AGDGCQKRARPVEIAFEHGPQQELLKKKQCVGV
Sb025645_Sorbi1 VATKAVRLFGVDLLTAPAATAAAPAEAMAAGC-KRARDLASP------PQAAFKKQLVEL
                   :.:*****::                 *  **..                *** :  

AT1G13260.1     AS-----------
Sb024795_Sorbi1 AHHRSPALGAFLL
Sb025645_Sorbi1 ALV----------
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G13260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S S S - - V D E S T
Sb024795_Sorbi1    R R I L S I T G R R A A A G S R V P K Q K S K K P K A A R L Q G A A R A V A L A H L I M G I E S M S P T A A P A E D S S
Sb025645_Sorbi1    - - - - - - - - - - - - - - - - - P A S S S - - - - - - - - - - - - - - - - - - - - - - G A L K M D S A S S L V D D T S
 
AT1G13260.1     T S T G - - - - - - - S I C E T P A I T P A K K S S V G N L Y R M G S G S S V V - L D - S - - - E N G V E A E S R - - -
Sb024795_Sorbi1    S S S S R F S A A S T A T T E S G A A Q P R A A S A A P - - - - - G G G A V V V G R D A S L A D E Q A V T S Q P L A A S
Sb025645_Sorbi1    S G S G G - - G G G A S T D K L R A L A V A A A A S G P P L E R M G S G A S A V - L D A A - - - E P G A E A D S A A A A
 
AT1G13260.1     - - - - - - - - - K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D V A V H R F
Sb024795_Sorbi1    T A A A V A Q G - - - - S S R F K G V V P Q P N G R W G A Q I Y E R H A R V W L G T F A D E E A A A R A Y D V A A L R Y
Sb025645_Sorbi1    A P G A V G V G G K L P S S R Y K G V V P Q P N G R W G A Q I Y E R H Q R V W L G T F A G E A D A A R A Y D V A A Q R F
 
AT1G13260.1     R R R D A V T N F K D V K M D E D - - - - - E V D F L N S H S K S E I V D M L R K H T Y N E E L E Q S K R - - - - R R N
Sb024795_Sorbi1    R G R E A A T N F P G A G A S A P - - - - - E L T F L A A H S K A E I V D M L R K H T Y A D E L R Q G L R - - - - R G R
Sb025645_Sorbi1    R G R D A V T N F R P L A - D A D P D A A A E L R F L A S R S K A E V V D M L R K H T Y F D E L A Q N K R A F A A A A A
 
AT1G13260.1     G N G N M T R T L L T S G L S N D G V S T T G F R S A - - - - - - E A L F E K A V T P S D V G K L N R L V I P K H H A E
Sb024795_Sorbi1    G M G A R A Q - - - - - - - - - - - - - - - - - - - P T P A W A R S L L F E K A V T P S D V G K L N R L V V P K Q H A E
Sb025645_Sorbi1    A A A S S A A T T T A S S L A N N N N N H S S L A S P S P A T A R E H L F D K T V T P S D V G K L N R L V I P K Q H A E
 
AT1G13260.1     K H F P - - - L P S S N V S V - - - - K G V L L N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K
Sb024795_Sorbi1    K H F P L K R A P E A S A A A A T T G K G V L L N F E D G E G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E K
Sb025645_Sorbi1    K H F P L - Q L P S A G G E S - - - - K G V L L N L E D A A G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K
 
AT1G13260.1     N L R A G D V V S F S R S N - - - - G Q D Q Q L Y I G W K S R S G S D L D A G - - - - - - - - - - - - - - - - - - - - -
Sb024795_Sorbi1    G L R A G D T I V F S H S T - - - Y S S E K Q L F I D C K K T K T T T V A T T - - - - - - - - D G A P V P A P A E K K P
Sb025645_Sorbi1    G L Q A G D V V G F Y R S S A V G A G A D T K L F I D C K L R P N S V A T A S T T T G P A V G S S P P A P A P A - - - P
 
AT1G13260.1     - - - R V L R L F G V N I - - S P E S S R N D - - - - - V V G N - K R V N D T E M L - - - - - - S L V C S K K Q R I F H
Sb024795_Sorbi1    S E A R V V R L F G V D I - - - - - - - - - - - - - - A G D G C Q K R A R P V E I A F E H G P Q Q E L L K K K Q C V G V
Sb025645_Sorbi1    V A T K A V R L F G V D L L T A P A A T A A A P A E A M A A G C - K R A R D L A S P - - - - - - P Q A A F K K Q L V E L
 
AT1G13260.1     A S - - - - - - - - - - -
Sb024795_Sorbi1    A H H R S P A L G A F L L
Sb025645_Sorbi1    A L V - - - - - - - - - -
 
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