fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014462 not found in 390aa AT3G57670.1 1st_not 0.548060708 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13290.1     ---MYNNNQYSFSGDEDSVVLS-----------LGP--PGQ-------------------
pp014462_Pp1s20 MSSRYN--------PQNSVAVAHPNIPTTFCEWLKPSQPGQPLSHYPVAIPYEGVYPGFA
                    **         ::**.::           * *  ***                   

AT1G13290.1     ----------------------QYP--------------SHNKPTSTKPSSDHEFNH---
pp014462_Pp1s20 TGSSSESYFPVQPRSPAPVHRLQYPPADQYGYSCNSHQQSHDQFYNQQTRDEHEWRQRWH
                                      ***              **::  . :. .:**:.:   

AT1G13290.1     --------------PLTNPNG----------------------------VTVALHIGPPS
pp014462_Pp1s20 LQNNSMSSEPLPFLSLSPPTGRDDLSDSVMRTAILLPEASHASEESDENVTVALHIGPPS
                              .*: *.*                            ***********

AT1G13290.1     SDKETLSGGNNQE------GLTAR-----------QGQYWIPSLSQILVGPTQFSCSVCN
pp014462_Pp1s20 SDAMSMSRSTESPSVYDSLSLAERERLQRGRGRLLEGEYWIPTPAQILVGPTQFSCPVCN
                **  ::* ..:.       .*: *           :*:****: :***********.***

AT1G13290.1     KTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPL
pp014462_Pp1s20 KTFNRYNNMQMHMWGHGSQYRKGPESLRGTQ-PTAMLRLPCYCCAPGCRNNIDHPRSKPL
                *****:************************: .:::********* **:***********

AT1G13290.1     KDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSL
pp014462_Pp1s20 KDFRTLQTHYKRKHGIKPFMCR-KCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHKRSL
                *************** *** ** **.*:********************.***********

AT1G13290.1     KDHVRAFGDGHAAHTVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAHEENVRGEKNYGIR
pp014462_Pp1s20 KDHIRAFGNGHAAHGM--------DSCED-------EEDAVSEEDIDEEVSGGSQ-----
                ***:****:***** :        *: **       *** *.*** .**   *.:     

AT1G13290.1     YDHFRRYGQISDDNY
pp014462_Pp1s20 ---------------
BoxShade v3.31 C (beta, 970507) Output
AT1G13290.1     - - - M Y N N N Q Y S F S G D E D S V V L S - - - - - - - - - - - L G P - - P G Q - - - - - - - - - - - - - - - - - - -
pp014462_Pp1s20    M S S R Y N - - - - - - - - P Q N S V A V A H P N I P T T F C E W L K P S Q P G Q P L S H Y P V A I P Y E G V Y P G F A
 
AT1G13290.1     - - - - - - - - - - - - - - - - - - - - - - Q Y P - - - - - - - - - - - - - - S H N K P T S T K P S S D H E F N H - - -
pp014462_Pp1s20    T G S S S E S Y F P V Q P R S P A P V H R L Q Y P P A D Q Y G Y S C N S H Q Q S H D Q F Y N Q Q T R D E H E W R Q R W H
 
AT1G13290.1     - - - - - - - - - - - - - - P L T N P N G - - - - - - - - - - - - - - - - - - - - - - - - - - - - V T V A L H I G P P S
pp014462_Pp1s20    L Q N N S M S S E P L P F L S L S P P T G R D D L S D S V M R T A I L L P E A S H A S E E S D E N V T V A L H I G P P S
 
AT1G13290.1     S D K E T L S G G N N Q E - - - - - - G L T A R - - - - - - - - - - - Q G Q Y W I P S L S Q I L V G P T Q F S C S V C N
pp014462_Pp1s20    S D A M S M S R S T E S P S V Y D S L S L A E R E R L Q R G R G R L L E G E Y W I P T P A Q I L V G P T Q F S C P V C N
 
AT1G13290.1     K T F N R F N N M Q M H M W G H G S Q Y R K G P E S L R G T K S S S S I L R L P C Y C C A E G C K N N I D H P R S K P L
pp014462_Pp1s20    K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q - P T A M L R L P C Y C C A P G C R N N I D H P R S K P L
 
AT1G13290.1     K D F R T L Q T H Y K R K H G A K P F R C R K K C E K T F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L
pp014462_Pp1s20    K D F R T L Q T H Y K R K H G I K P F M C R - K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K R S L
 
AT1G13290.1     K D H V R A F G D G H A A H T V S D R V V G I G D A D E D D E E E E E E E E D D V E E E D A H E E N V R G E K N Y G I R
pp014462_Pp1s20    K D H I R A F G N G H A A H G M - - - - - - - - D S C E D - - - - - - - E E D A V S E E D I D E E V S G G S Q - - - - -
 
AT1G13290.1     Y D H F R R Y G Q I S D D N Y
pp014462_Pp1s20    - - - - - - - - - - - - - - -
 
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