fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp013471 not found in 444aa AT3G57670.1 not_not 0.544688026 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13290.1     ----------------------------MYNNNQYSFS----------------------
pp013471_Pp1s35 MSFKGAKKFVIRFSATATDSGSAVAGVGKYSGSRVLFSSYTNGPELSHLLERNSTLSELD
                                             *...:  **                      

AT1G13290.1     ------GDEDSVVLS---------------------LGP--PGQQYPSH-----------
pp013471_Pp1s35 IDTVENSKDDSATMSSRYNPQSSVAVAHPILTFCEWLKPSQPGQSLPHYPVAIPCESLYP
                      ..:**..:*                     * *  ***. * :           

AT1G13290.1     -------------NKPTSTKP---------------SSDHEF------------------
pp013471_Pp1s35 GSASGSSCESYFPAQPRSSNPIHRRQLQAQFYNQQARDEHEWRQQRHLQKDVSSEPLPFL
                              :* *::*                .:**:                  

AT1G13290.1     -------NHPLTNP-------------------NGVTVALHIGPPSSDKETLSGGNN---
pp013471_Pp1s35 SLSPPTGNDDLSDPALRTAILLPEASHASEESDENVTVALHIGPPSSDAMSMSRSTESPS
                       *. *::*                   :.*************  ::* ..:   

AT1G13290.1     -------------QEGLTA-RQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW
pp013471_Pp1s35 VYDSLSLVERERLQRGQSRLHEGQYWIPTPAQILVGPTQFSCPVCNKTFNRYNNMQMHMW
                             *.* :  ::******: :***********.********:********

AT1G13290.1     GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH
pp013471_Pp1s35 GHGSQYRKGPESLRGTQ-PTAMLRLACYCCSPGCRNNIDHPRSKPLKDFRTLQTHYKRKH
                ****************: .:::***.****: **:*************************

AT1G13290.1     GAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAH
pp013471_Pp1s35 GIKPFMCR-KCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHKRSLKDHIRAFGNGHAAH
                * *** ** **.*:********************.**************:****:*****

AT1G13290.1     TVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAHEENVRGEKNYGIRYDHFRRYGQISDDN
pp013471_Pp1s35 GI--------DSCEDD-------EDPVSEEDGDEEVSGGSH-------------------
                 :        *: ***       ** *.***..**   *.:                   

AT1G13290.1     Y
pp013471_Pp1s35 -
BoxShade v3.31 C (beta, 970507) Output
AT1G13290.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Y N N N Q Y S F S - - - - - - - - - - - - - - - - - - - - - -
pp013471_Pp1s35    M S F K G A K K F V I R F S A T A T D S G S A V A G V G K Y S G S R V L F S S Y T N G P E L S H L L E R N S T L S E L D
 
AT1G13290.1     - - - - - - G D E D S V V L S - - - - - - - - - - - - - - - - - - - - - L G P - - P G Q Q Y P S H - - - - - - - - - - -
pp013471_Pp1s35    I D T V E N S K D D S A T M S S R Y N P Q S S V A V A H P I L T F C E W L K P S Q P G Q S L P H Y P V A I P C E S L Y P
 
AT1G13290.1     - - - - - - - - - - - - - N K P T S T K P - - - - - - - - - - - - - - - S S D H E F - - - - - - - - - - - - - - - - - -
pp013471_Pp1s35    G S A S G S S C E S Y F P A Q P R S S N P I H R R Q L Q A Q F Y N Q Q A R D E H E W R Q Q R H L Q K D V S S E P L P F L
 
AT1G13290.1     - - - - - - - N H P L T N P - - - - - - - - - - - - - - - - - - - N G V T V A L H I G P P S S D K E T L S G G N N - - -
pp013471_Pp1s35    S L S P P T G N D D L S D P A L R T A I L L P E A S H A S E E S D E N V T V A L H I G P P S S D A M S M S R S T E S P S
 
AT1G13290.1     - - - - - - - - - - - - - Q E G L T A - R Q G Q Y W I P S L S Q I L V G P T Q F S C S V C N K T F N R F N N M Q M H M W
pp013471_Pp1s35    V Y D S L S L V E R E R L Q R G Q S R L H E G Q Y W I P T P A Q I L V G P T Q F S C P V C N K T F N R Y N N M Q M H M W
 
AT1G13290.1     G H G S Q Y R K G P E S L R G T K S S S S I L R L P C Y C C A E G C K N N I D H P R S K P L K D F R T L Q T H Y K R K H
pp013471_Pp1s35    G H G S Q Y R K G P E S L R G T Q - P T A M L R L A C Y C C S P G C R N N I D H P R S K P L K D F R T L Q T H Y K R K H
 
AT1G13290.1     G A K P F R C R K K C E K T F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L K D H V R A F G D G H A A H
pp013471_Pp1s35    G I K P F M C R - K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K R S L K D H I R A F G N G H A A H
 
AT1G13290.1     T V S D R V V G I G D A D E D D E E E E E E E E D D V E E E D A H E E N V R G E K N Y G I R Y D H F R R Y G Q I S D D N
pp013471_Pp1s35    G I - - - - - - - - D S C E D D - - - - - - - E D P V S E E D G D E E V S G G S H - - - - - - - - - - - - - - - - - - -
 
AT1G13290.1     Y
pp013471_Pp1s35    -
 
0