fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033478 not found in 275aa AT1G13290.1 1st_1st 0.620573355 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13290.1     MYNNNQYSF-------------SGDEDSVVLSLGPPGQQ----YPSHNKPTSTKPSSDHE
pt033478_POPTR_ -MQTPSFAYISSIESAYIEADDQGDEESLFLSLSPPGQQHITRHPNHRR-SSIHPRNIQE
                  :. .:::             .***:*:.***.*****    :*.*.: :* :* . :*

AT1G13290.1     FNHPLTNPNGVTVALHIGPPSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSC
pt033478_POPTR_ --NPSNFESGVTIALHIGPPTAGARTSNHPDNHIG-SLVEGQYWIPSPAQILVGPTQFTC
                  :* .  .***:*******::. .* .  :*: * :  :******* :*********:*

AT1G13290.1     SVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPR
pt033478_POPTR_ SVCNKTFNRYNNMQMHMWGHGSQYRKGPDSLKGPKQASSTLRLPCYCCAEGCKNNIEHPR
                *********:******************:**:*.*.:** ****************:***

AT1G13290.1     SKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKH
pt033478_POPTR_ SRPLKDFKTLQTHYKRKHGAKPFGCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKH
                *:*****:*************** ** ** *.********************:*******

AT1G13290.1     KRSLKDHVRAFGDGHAAHTVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAHEENVRGEKN
pt033478_POPTR_ KRSLKDHVRAFGDGHAAHTV--------DMCHDIDEEEDQEDDINNMED-----------
                ********************        *  .* :***::*:*  : **           

AT1G13290.1     YGIRYDHFRRYGQISDDNY
pt033478_POPTR_ -------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G13290.1     M Y N N N Q Y S F - - - - - - - - - - - - - S G D E D S V V L S L G P P G Q Q - - - - Y P S H N K P T S T K P S S D H E
pt033478_POPTR_    - M Q T P S F A Y I S S I E S A Y I E A D D Q G D E E S L F L S L S P P G Q Q H I T R H P N H R R - S S I H P R N I Q E
 
AT1G13290.1     F N H P L T N P N G V T V A L H I G P P S S D K E T L S G G N N Q E G L T A R Q G Q Y W I P S L S Q I L V G P T Q F S C
pt033478_POPTR_    - - N P S N F E S G V T I A L H I G P P T A G A R T S N H P D N H I G - S L V E G Q Y W I P S P A Q I L V G P T Q F T C
 
AT1G13290.1     S V C N K T F N R F N N M Q M H M W G H G S Q Y R K G P E S L R G T K S S S S I L R L P C Y C C A E G C K N N I D H P R
pt033478_POPTR_    S V C N K T F N R Y N N M Q M H M W G H G S Q Y R K G P D S L K G P K Q A S S T L R L P C Y C C A E G C K N N I E H P R
 
AT1G13290.1     S K P L K D F R T L Q T H Y K R K H G A K P F R C R K K C E K T F A V R G D W R T H E K N C G K L W F C V C G S D F K H
pt033478_POPTR_    S R P L K D F K T L Q T H Y K R K H G A K P F G C R - K C G K P F A V R G D W R T H E K N C G K L W F C I C G S D F K H
 
AT1G13290.1     K R S L K D H V R A F G D G H A A H T V S D R V V G I G D A D E D D E E E E E E E E D D V E E E D A H E E N V R G E K N
pt033478_POPTR_    K R S L K D H V R A F G D G H A A H T V - - - - - - - - D M C H D I D E E E D Q E D D I N N M E D - - - - - - - - - - -
 
AT1G13290.1     Y G I R Y D H F R R Y G Q I S D D N Y
pt033478_POPTR_    - - - - - - - - - - - - - - - - - - -
 
0