fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004016 not found in 404aa AT3G57670.1 1st_not 0.509274873 II
Sb005614 not found in 370aa AT1G13290.1 not_1st 0.504215851 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13290.1     ------------MYNNNQYSFS------------GDEDSVVLSLGPPGQQY--PS-----
Sb004016_Sorbi1 -----MGDPYTNFLRGYYSHFPP-------------------SNAPPVTSF--PSSYASS
Sb005614_Sorbi1 MHSYRAMHPYTHPYQHHTAAVAPTKHGHGHGEEEDDQSMLLLSLWPPGQHHGIAA-----
                              .     ..                    *  **   .  .:     

AT1G13290.1     ---HNKPTSTKP--------------------------------------------SSDH
Sb004016_Sorbi1 YLHHPPPPPSPPIREALPLLSNLTPSSSSA--TNHHHHHGGGDVQDHKDCCKRATSCSDD
Sb005614_Sorbi1 ---ASSACSSPPICATTTTTTSMAAAASYPWLTTHQSHYNGG--------CGGGSSSSSH
                      . .: *                                            .*..

AT1G13290.1     E----FNHPLTNPNGVTVALHIGPPS---SDKETLSGGNNQEGLTARQG-----------
Sb004016_Sorbi1 Q----EAADQAAAGEVTVALHIGLPSPSPSDSAA-DGGDSQEPAAAEGR-SQLQQQEGGG
Sb005614_Sorbi1 SSFLFHEHQQQEPD-VSISLSIAPPC---SNTAA-SCGAAAGGFAAPAAPSTVTTVTPGG
                .           .. *:::* *. *.   *:. : . *      :*              

AT1G13290.1     ------------------------------QYWIPSLSQILVGPTQFSCSVCNKTFNRFN
Sb004016_Sorbi1 GEEEEEEEGEEDAAMAVGCASIGIGRLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYN
Sb005614_Sorbi1 SQ-------------------------VPSQYWIPSAAEILVGSTQFSCAVCNKTFNRFN
                                              *****: ::**:*.*****.** *****:*

AT1G13290.1     NMQMHMWGHGSQYRKGPESLR-----GTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKD
Sb004016_Sorbi1 NMQMHMWGHGSQYRKGPESLR-----GTQPTA-MLRLPCYCCAAGCRNNIDHPRARPLKD
Sb005614_Sorbi1 NMQMHMWGHGSQYRKGSESLRGAITVGTAPPASLMRLPCYCCAEGCRNNIEHPRARPLKD
                ****************.****     ** ..: ::******** **:***:***::****

AT1G13290.1     FRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKD
Sb004016_Sorbi1 FRTLQTHYRRKHGIKPFMCR-KCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKD
Sb005614_Sorbi1 FRTLQTHYRRKHGARPYACR-RCGKRFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKD
                ********:**** :*: ** :* * ******************:*.*************

AT1G13290.1     HVRAFGDGHAAHTVSDRVVGIGDADEDDEEEEEEEEDDVEEEDAH--EENVRGEKNYGI-
Sb004016_Sorbi1 HIRAFGRGHAACGI--------DCFDDLDDDDRDPSSEVDHAAAAAANNTTTTTSSAAAA
Sb005614_Sorbi1 HVRSFGGGHAPHIVESVAV----------EDDEEDDDDHDDADLHAFDDNVGNGGGAG--
                *:*:** ***.  :               :::.: ..: :.      ::..    . .  

AT1G13290.1     ----RYDHF----------------RRYGQISDDNY-
Sb004016_Sorbi1 NAQAQHHHHHSVWKPPPPPPLSSSSRGSGDPLL----
Sb005614_Sorbi1 ----------------------------GEPSDMVVV
                                            *:
BoxShade v3.31 C (beta, 970507) Output
AT1G13290.1     - - - - - - - - - - - - M Y N N N Q Y S F S - - - - - - - - - - - - G D E D S V V L S L G P P G Q Q Y - - P S - - - - -
Sb004016_Sorbi1    - - - - - M G D P Y T N F L R G Y Y S H F P P - - - - - - - - - - - - - - - - - - - S N A P P V T S F - - P S S Y A S S
Sb005614_Sorbi1    M H S Y R A M H P Y T H P Y Q H H T A A V A P T K H G H G H G E E E D D Q S M L L L S L W P P G Q H H G I A A - - - - -
 
AT1G13290.1     - - - H N K P T S T K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S D H
Sb004016_Sorbi1    Y L H H P P P P P S P P I R E A L P L L S N L T P S S S S A - - T N H H H H H G G G D V Q D H K D C C K R A T S C S D D
Sb005614_Sorbi1    - - - A S S A C S S P P I C A T T T T T T S M A A A A S Y P W L T T H Q S H Y N G G - - - - - - - - C G G G S S S S S H
 
AT1G13290.1     E - - - - F N H P L T N P N G V T V A L H I G P P S - - - S D K E T L S G G N N Q E G L T A R Q G - - - - - - - - - - -
Sb004016_Sorbi1    Q - - - - E A A D Q A A A G E V T V A L H I G L P S P S P S D S A A - D G G D S Q E P A A A E G R - S Q L Q Q Q E G G G
Sb005614_Sorbi1    S S F L F H E H Q Q Q E P D - V S I S L S I A P P C - - - S N T A A - S C G A A A G G F A A P A A P S T V T T V T P G G
 
AT1G13290.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Y W I P S L S Q I L V G P T Q F S C S V C N K T F N R F N
Sb004016_Sorbi1    G E E E E E E E G E E D A A M A V G C A S I G I G R L T K G Q Y W I P T P S Q I L I G P T Q F S C P V C Y K T F N R Y N
Sb005614_Sorbi1    S Q - - - - - - - - - - - - - - - - - - - - - - - - - V P S Q Y W I P S A A E I L V G S T Q F S C A V C N K T F N R F N
 
AT1G13290.1     N M Q M H M W G H G S Q Y R K G P E S L R - - - - - G T K S S S S I L R L P C Y C C A E G C K N N I D H P R S K P L K D
Sb004016_Sorbi1    N M Q M H M W G H G S Q Y R K G P E S L R - - - - - G T Q P T A - M L R L P C Y C C A A G C R N N I D H P R A R P L K D
Sb005614_Sorbi1    N M Q M H M W G H G S Q Y R K G S E S L R G A I T V G T A P P A S L M R L P C Y C C A E G C R N N I E H P R A R P L K D
 
AT1G13290.1     F R T L Q T H Y K R K H G A K P F R C R K K C E K T F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L K D
Sb004016_Sorbi1    F R T L Q T H Y R R K H G I K P F M C R - K C G K A F A V R G D W R T H E K N C G K L W Y C A C G S D F K H K R S L K D
Sb005614_Sorbi1    F R T L Q T H Y R R K H G A R P Y A C R - R C G K R F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L K D
 
AT1G13290.1     H V R A F G D G H A A H T V S D R V V G I G D A D E D D E E E E E E E E D D V E E E D A H - - E E N V R G E K N Y G I -
Sb004016_Sorbi1    H I R A F G R G H A A C G I - - - - - - - - D C F D D L D D D D R D P S S E V D H A A A A A A N N T T T T T S S A A A A
Sb005614_Sorbi1    H V R S F G G G H A P H I V E S V A V - - - - - - - - - - E D D E E D D D D H D D A D L H A F D D N V G N G G G A G - -
 
AT1G13290.1     - - - - R Y D H F - - - - - - - - - - - - - - - - R R Y G Q I S D D N Y -
Sb004016_Sorbi1    N A Q A Q H H H H H S V W K P P P P P P L S S S S R G S G D P L L - - - -
Sb005614_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - G E P S D M V V V
 
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