fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028284 not found in 210aa AT1G13290.1 not_1st 0.543001686 II
Gm001000 not found in 181aa AT1G13290.1 not_1st 0.527824620 II
Gm003566 not found in 166aa AT1G13290.1 not_1st 0.465430016 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13290.1     MYNNNQYSFSGDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEFNHPLTNPN---GVTVA
gm003566_Glyma0 ------------------------------------------------------------
gm001000_Glyma0 ------------------------MSIP--------------------KGANMVLERPLV
gm028284_Glyma1 --------------------------MPDHHQ----------------QNPDLISGVTVA
                                                                            

AT1G13290.1     LHIGPPSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQ
gm003566_Glyma0 ---------------------------------------------------MFNRFNNMQ
gm001000_Glyma0 LEIRPADAEPEP---------------------PAVLLVRPPVTS------HCKRLPAL-
gm028284_Glyma1 LHIGLPTTKPSS---------PTPIHCRYWIPTPQQILIGPTQFSCTVCNKTFNRFNNMQ
                                                                     :*:  : 

AT1G13290.1     MHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHY
gm003566_Glyma0 MHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHY
gm001000_Glyma0 -----------PAPERLRTVLPLVVRLERP---------EVLQRPRPWVLD---VVLAAL
gm028284_Glyma1 MHMWGHGSQYRKGAESLRGSKAGSSMLRLPCYCCEEGCKNNINYPRSKPLKDFRTLQTHY
                            ..* **   .    *. *         : :: **.  *.   .: :  

AT1G13290.1     KRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDG
gm003566_Glyma0 KRKHGAKPFGCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDG
gm001000_Glyma0 RAAVAGKPQH-----------RGCWLCAPKRFGA---------FSVLRAVSPHV------
gm028284_Glyma1 KRKHGGKPFECR-KCHKPFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGNG
                :   ..**             ** *    *. *          *.  *::. **      

AT1G13290.1     HAAHTV-------SDRVVGIGDADEDDEEEEEEEEDDVEEEDA-HEENVRGEK-NYGIRY
gm003566_Glyma0 HAPHTVESCGRVGEDGLLLLGD---DDDDELEVEEDD-EEED------------------
gm001000_Glyma0 HLLHVVETVEHFVADSARELGGA--NEDLS--------RRRDPILALNVGGSRGQMKIR-
gm028284_Glyma1 HAPHNLLS-----EERENEGGD---DDDNE------------------------------
                *  * :        :     *.   ::: .                              

AT1G13290.1     DHFRRYGQISDDNY------
gm003566_Glyma0 --------------------
gm001000_Glyma0 -------QLASSSWGGGTVC
gm028284_Glyma1 --------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G13290.1     M Y N N N Q Y S F S G D E D S V V L S L G P P G Q Q Y P S H N K P T S T K P S S D H E F N H P L T N P N - - - G V T V A
gm003566_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm001000_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - M S I P - - - - - - - - - - - - - - - - - - - - K G A N M V L E R P L V
gm028284_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - M P D H H Q - - - - - - - - - - - - - - - - Q N P D L I S G V T V A
 
AT1G13290.1     L H I G P P S S D K E T L S G G N N Q E G L T A R Q G Q Y W I P S L S Q I L V G P T Q F S C S V C N K T F N R F N N M Q
gm003566_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F N R F N N M Q
gm001000_Glyma0    L E I R P A D A E P E P - - - - - - - - - - - - - - - - - - - - - P A V L L V R P P V T S - - - - - - H C K R L P A L -
gm028284_Glyma1    L H I G L P T T K P S S - - - - - - - - - P T P I H C R Y W I P T P Q Q I L I G P T Q F S C T V C N K T F N R F N N M Q
 
AT1G13290.1     M H M W G H G S Q Y R K G P E S L R G T K S S S S I L R L P C Y C C A E G C K N N I D H P R S K P L K D F R T L Q T H Y
gm003566_Glyma0    M H M W G H G S Q Y R K G P E S L R G A K P A S S M L R L P C Y C C A E G C K N N I E H P R S R P L K D F R T L Q T H Y
gm001000_Glyma0    - - - - - - - - - - - P A P E R L R T V L P L V V R L E R P - - - - - - - - - E V L Q R P R P W V L D - - - V V L A A L
gm028284_Glyma1    M H M W G H G S Q Y R K G A E S L R G S K A G S S M L R L P C Y C C E E G C K N N I N Y P R S K P L K D F R T L Q T H Y
 
AT1G13290.1     K R K H G A K P F R C R K K C E K T F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L K D H V R A F G D G
gm003566_Glyma0    K R K H G A K P F G C R - K C G K P F A V R G D W R T H E K N C G K L W F C I C G S D F K H K R S L K D H V R A F G D G
gm001000_Glyma0    R A A V A G K P Q H - - - - - - - - - - - R G C W L C A P K R F G A - - - - - - - - - F S V L R A V S P H V - - - - - -
gm028284_Glyma1    K R K H G G K P F E C R - K C H K P F A V R G D W R T H E K N C G K L W F C V C G S D F K H K R S L K D H V R A F G N G
 
AT1G13290.1     H A A H T V - - - - - - - S D R V V G I G D A D E D D E E E E E E E E D D V E E E D A - H E E N V R G E K - N Y G I R Y
gm003566_Glyma0    H A P H T V E S C G R V G E D G L L L L G D - - - D D D D E L E V E E D D - E E E D - - - - - - - - - - - - - - - - - -
gm001000_Glyma0    H L L H V V E T V E H F V A D S A R E L G G A - - N E D L S - - - - - - - - R R R D P I L A L N V G G S R G Q M K I R -
gm028284_Glyma1    H A P H N L L S - - - - - E E R E N E G G D - - - D D D N E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G13290.1     D H F R R Y G Q I S D D N Y - - - - - -
gm003566_Glyma0    - - - - - - - - - - - - - - - - - - - -
gm001000_Glyma0    - - - - - - - Q L A S S S W G G G T V C
gm028284_Glyma1    - - - - - - - - - - - - - - - - - - - -
 
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