fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041034 not found in 383aa AT1G68670.1 1st_not 0.476043276 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13300.1     MIKKFSNMDYNQKRERCGQYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMT
pt041034_POPTR_ -------MDFAEKIQRCGEYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTT
                       **: :* :***:*:**********:**:*******:*************.  *

AT1G13300.1     TE-NMYGQPECSEQTTGECGPVLEQFLTIKDSSTSNEEEDEEFDDEHGNHDPDNDSEDKN
pt041034_POPTR_ TEYNMHGQSECSEQTSSE-GPVLEEFIPIK-RTHSYDENDNENDDHQEQQSHDNSKRNKT
                ** **:**.******:.* *****:*:.**  : * :*:*:* **.: ::. **...:*.

AT1G13300.1     T----------KSDWLKSVQLWNQPDHPLLPKEERLQQETM-------------------
pt041034_POPTR_ SISSGNNDHKKKSDWLRSVQLWNHS--PDLPQKQVLKAAVTEVKRNGAGGAFQPFHREKS
                :          *****:******:.  * **::: *:  .                    

AT1G13300.1     ---TRDESMRKDPM-----------------VNGGEGRKREAEKDGGGGRKQRRCWSSQL
pt041034_POPTR_ IGKTSNQAIAKAPTSVPASTTSSTAVVATGGIGGGSNKKEDI--DGGNQRKQRRCWSPEL
                   * :::: * *                  :.**..:*.:   ***. ********.:*

AT1G13300.1     HRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNGNS
pt041034_POPTR_ HRRFLHALRQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIHNNSNQ
                *****:**::***.*.********:*************************  *: **.*.

AT1G13300.1     QTQHFVVVGGLWVPQSDYST-GKTTGGATTSSTTTTTGIYGTMAAPPP--PQWPSHSNYR
pt041034_POPTR_ QAPQFVVVGGIWVPPPEYAAVAATTASAETSPISAANGIYAPIAAAPPTVPQKPHHVQYE
                *: :******:*** .:*:: . **..* **. :::.***..:**.**  ** * * :*.

AT1G13300.1     PSIIVDEGSGSHSEGVVVRCSSPAMSSSTRNHYVKNN-
pt041034_POPTR_ P--LQSEGGGSHSEGGAHSNNSPATSSSTHTTTTTRSN
                *  : .**.****** .   .*** ****:.  ....
BoxShade v3.31 C (beta, 970507) Output
AT1G13300.1     M I K K F S N M D Y N Q K R E R C G Q Y I E A L E E E R R K I H V F Q R E L P L C L D L V T Q A I E A C K R E L P E M T
pt041034_POPTR_    - - - - - - - M D F A E K I Q R C G E Y V E A L E E E R R K I Q V F E R E L P L C L E L V T Q A I E A C K R E L S G T T
 
AT1G13300.1     T E - N M Y G Q P E C S E Q T T G E C G P V L E Q F L T I K D S S T S N E E E D E E F D D E H G N H D P D N D S E D K N
pt041034_POPTR_    T E Y N M H G Q S E C S E Q T S S E - G P V L E E F I P I K - R T H S Y D E N D N E N D D H Q E Q Q S H D N S K R N K T
 
AT1G13300.1     T - - - - - - - - - - K S D W L K S V Q L W N Q P D H P L L P K E E R L Q Q E T M - - - - - - - - - - - - - - - - - - -
pt041034_POPTR_    S I S S G N N D H K K K S D W L R S V Q L W N H S - - P D L P Q K Q V L K A A V T E V K R N G A G G A F Q P F H R E K S
 
AT1G13300.1     - - - T R D E S M R K D P M - - - - - - - - - - - - - - - - - V N G G E G R K R E A E K D G G G G R K Q R R C W S S Q L
pt041034_POPTR_    I G K T S N Q A I A K A P T S V P A S T T S S T A V V A T G G I G G G S N K K E D I - - D G G N Q R K Q R R C W S P E L
 
AT1G13300.1     H R R F L N A L Q H L G G P H V A T P K Q I R E F M K V D G L T N D E V K S H L Q K Y R L H T R R P R Q T V P N N G N S
pt041034_POPTR_    H R R F L H A L R Q L G G S H A A T P K Q I R E L M K V D G L T N D E V K S H L Q K Y R L H T R R P S P T I H N N S N Q
 
AT1G13300.1     Q T Q H F V V V G G L W V P Q S D Y S T - G K T T G G A T T S S T T T T T G I Y G T M A A P P P - - P Q W P S H S N Y R
pt041034_POPTR_    Q A P Q F V V V G G I W V P P P E Y A A V A A T T A S A E T S P I S A A N G I Y A P I A A A P P T V P Q K P H H V Q Y E
 
AT1G13300.1     P S I I V D E G S G S H S E G V V V R C S S P A M S S S T R N H Y V K N N -
pt041034_POPTR_    P - - L Q S E G G G S H S E G G A H S N N S P A T S S S T H T T T T T R S N
 
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