fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034451 not found in 390aa AT1G25550.1 not_not 0.455950540 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13300.1     MIKKFSNMDYNQKRERCGQYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMT
pt034451_POPTR_ -------MDFAEKMQRCHEYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTT
                       **: :* :** :*:**********:**:*******:*************.  *

AT1G13300.1     TE-NMYGQPECSEQTTGECGPVLEQFLTIKDSSTSNEEEDEEF--DDEHGNHDPDNDSE-
pt034451_POPTR_ EDHNMHGQSECSEQTSSE-GPVLEEFIPIKRTHSSDDEENDNNHDDDDHQEQQSQNDNKR
                 : **:**.******:.* *****:*:.** : :*::**:::   **:* :::.:**.: 

AT1G13300.1     ----------DKNTKSDWLKSVQLWNQ-PDHPL---LPKEERLQQ----------ETMTR
pt034451_POPTR_ NKSNSSISNNDHKKKSDWLRSVQLWNQSPDPPQKQDLPRKAAVTEVKRNGAGGAFQPFHR
                          *::.*****:******* ** *    **::  : :          :.: *

AT1G13300.1     DESMRKD---------PMV---------------NGGEGRKREAEKDGGGGRKQRRCWSS
pt034451_POPTR_ EKSVGKSSNQAISKAPPSVPASATSSIAGAVTGGTGGGGNKKE-DKEKGNQRKQRRCWSP
                ::*: *.         * *               .** *.*:* :*: *. ********.

AT1G13300.1     QLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNG
pt034451_POPTR_ ELHRRFLHSLQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIHTNS
                :******::**:***.*.********:*************************  *: .*.

AT1G13300.1     NSQTQHFVVVGGLWVPQSDYST-GKTTGGATTSSTTTTTGIYGTMAAPPP--PQWPSHSN
pt034451_POPTR_ SQQAPQFVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAAPPPAVPQNRQHKQ
                ..*: :******:*** ::*:: . ** .. **: :::.***..:*****  **  .*.:

AT1G13300.1     YRPSIIVDEGSGSHSE-GVVVRCSSPAMSSSTRNHYVKNN---
pt034451_POPTR_ SEHS--QSEGRGSHGERGGAHSNNSPATSSST--HTTTTSPVF
                 . *   .** ***.* * .   .*** ****  * ....
BoxShade v3.31 C (beta, 970507) Output
AT1G13300.1     M I K K F S N M D Y N Q K R E R C G Q Y I E A L E E E R R K I H V F Q R E L P L C L D L V T Q A I E A C K R E L P E M T
pt034451_POPTR_    - - - - - - - M D F A E K M Q R C H E Y V E A L E E E R R K I Q V F E R E L P L C L E L V T Q A I E A C K R E L S G T T
 
AT1G13300.1     T E - N M Y G Q P E C S E Q T T G E C G P V L E Q F L T I K D S S T S N E E E D E E F - - D D E H G N H D P D N D S E -
pt034451_POPTR_    E D H N M H G Q S E C S E Q T S S E - G P V L E E F I P I K R T H S S D D E E N D N N H D D D D H Q E Q Q S Q N D N K R
 
AT1G13300.1     - - - - - - - - - - D K N T K S D W L K S V Q L W N Q - P D H P L - - - L P K E E R L Q Q - - - - - - - - - - E T M T R
pt034451_POPTR_    N K S N S S I S N N D H K K K S D W L R S V Q L W N Q S P D P P Q K Q D L P R K A A V T E V K R N G A G G A F Q P F H R
 
AT1G13300.1     D E S M R K D - - - - - - - - - P M V - - - - - - - - - - - - - - - N G G E G R K R E A E K D G G G G R K Q R R C W S S
pt034451_POPTR_    E K S V G K S S N Q A I S K A P P S V P A S A T S S I A G A V T G G T G G G G N K K E - D K E K G N Q R K Q R R C W S P
 
AT1G13300.1     Q L H R R F L N A L Q H L G G P H V A T P K Q I R E F M K V D G L T N D E V K S H L Q K Y R L H T R R P R Q T V P N N G
pt034451_POPTR_    E L H R R F L H S L Q Q L G G S H A A T P K Q I R E L M K V D G L T N D E V K S H L Q K Y R L H T R R P S P T I H T N S
 
AT1G13300.1     N S Q T Q H F V V V G G L W V P Q S D Y S T - G K T T G G A T T S S T T T T T G I Y G T M A A P P P - - P Q W P S H S N
pt034451_POPTR_    S Q Q A P Q F V V V G G I W V P P T E Y A A V A A T T T A G E T S T I S A A N G I Y A P I A A P P P A V P Q N R Q H K Q
 
AT1G13300.1     Y R P S I I V D E G S G S H S E - G V V V R C S S P A M S S S T R N H Y V K N N - - -
pt034451_POPTR_    S E H S - - Q S E G R G S H G E R G G A H S N N S P A T S S S T - - H T T T T S P V F
 
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