fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003838 not found in 151aa AT3G30530.1 1st_not 0.419354838 II
Pt033625 not found in 200aa AT1G13600.1 not_1st 0.425219941 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13600.1     MNTIPAELTGYFHYLPPDKYNNQTP------IMESEYFNMPSSPTSCSSFYHLNGLINNN
pt033625_POPTR_ --MLPGELTG-IRYLTADQ--NLVPFPANFGMMQQS--NIPS--------FHFNRLLSNL
gm003838_Glyma0 --MVPS------------------------------------------------------
                   :*.                                                      

AT1G13600.1     NYSSSS-------NGQDLMTSNNSTSDE-DHQQSMVIDERKQRRMISNRESARRSRMRKQ
pt033625_POPTR_ QNSSLPQPVYEF-APQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQ
gm003838_Glyma0 ---------HEFVVPPSSCLSNNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQ
                                .   ******** :. *  :*****:******************

AT1G13600.1     RHLDELWSQVIRLRTDNHCLMDKLNRVSESHELALKENAKLKEETSDLRQLISEIKSHNE
pt033625_POPTR_ KHLDELWSQVVRLRTENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLTDFQIGSP
gm003838_Glyma0 KHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTS
                :*********:****:** *:***.:***.*: .*:***:**:*:**:**::::::  . 

AT1G13600.1     DDNSFLRELEDSISNSRS-----DSNQSGRDF-ELC--
pt033625_POPTR_ YTTTALRDLEEVPCNTAH-LRAESSNQSITSSVDLLH-
gm003838_Glyma0 FACT-MEDLEDLPCNTSQLLKPDPLNESITPA-DMIHE
                   : :.:**:  .*:         *:*     ::
BoxShade v3.31 C (beta, 970507) Output
AT1G13600.1     M N T I P A E L T G Y F H Y L P P D K Y N N Q T P - - - - - - I M E S E Y F N M P S S P T S C S S F Y H L N G L I N N N
pt033625_POPTR_    - - M L P G E L T G - I R Y L T A D Q - - N L V P F P A N F G M M Q Q S - - N I P S - - - - - - - - F H F N R L L S N L
gm003838_Glyma0    - - M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G13600.1     N Y S S S S - - - - - - - N G Q D L M T S N N S T S D E - D H Q Q S M V I D E R K Q R R M I S N R E S A R R S R M R K Q
pt033625_POPTR_    Q N S S L P Q P V Y E F - A P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q
gm003838_Glyma0    - - - - - - - - - H E F V V P P S S C L S N N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q
 
AT1G13600.1     R H L D E L W S Q V I R L R T D N H C L M D K L N R V S E S H E L A L K E N A K L K E E T S D L R Q L I S E I K S H N E
pt033625_POPTR_    K H L D E L W S Q V V R L R T E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T D F Q I G S P
gm003838_Glyma0    K H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I G T S
 
AT1G13600.1     D D N S F L R E L E D S I S N S R S - - - - - D S N Q S G R D F - E L C - -
pt033625_POPTR_    Y T T T A L R D L E E V P C N T A H - L R A E S S N Q S I T S S V D L L H -
gm003838_Glyma0    F A C T - M E D L E D L P C N T S Q L L K P D P L N E S I T P A - D M I H E
 
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