fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041671 not found in 200aa AT1G13600.1 1st_1st 0.445747800 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13600.1     MNTIPAELTGYFHYLPPDKYNNQTPIMESEYFNM---PSSPTSCSSFYHLNGLINNNNYS
pt041671_POPTR_ --MLPGELTG-IHYIAPD----QSLIPFPANFGMMQQSSIPA-----FHFNRLLNNLQSS
                   :*.**** :**:.**    *: *  .  *.*   .* *:     :*:* *:** : *

AT1G13600.1     S------SSNGQDLMTSNNSTSD--EDHQQSMVIDERKQRRMISNRESARRSRMRKQRHL
pt041671_POPTR_ SFPQPVREFTPQSSSLSNNSTSDESEEHQLS-IIDERKQRRMISNRESARRSRMRKQKHL
                *      . . *.   *******  *:** * :************************:**

AT1G13600.1     DELWSQVIRLRTDNHCLMDKLNRVSESHELALKENAKLKEETSDLRQLISEIKSHNEDDN
pt041671_POPTR_ DELWTQVVRLRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSPYTA
                ****:**:****:** *:****:***.*: .*:***:**:*:*****:*::::  .    

AT1G13600.1     SFLRELEDSISNS---RSD-SNQS-GRDFELC-
pt041671_POPTR_ TALRDLEEVPCNTAHVRAESSNQSVTSSVDLLH
                : **:**:  .*:   *:: ****   ..:*
BoxShade v3.31 C (beta, 970507) Output
AT1G13600.1     M N T I P A E L T G Y F H Y L P P D K Y N N Q T P I M E S E Y F N M - - - P S S P T S C S S F Y H L N G L I N N N N Y S
pt041671_POPTR_    - - M L P G E L T G - I H Y I A P D - - - - Q S L I P F P A N F G M M Q Q S S I P A - - - - - F H F N R L L N N L Q S S
 
AT1G13600.1     S - - - - - - S S N G Q D L M T S N N S T S D - - E D H Q Q S M V I D E R K Q R R M I S N R E S A R R S R M R K Q R H L
pt041671_POPTR_    S F P Q P V R E F T P Q S S S L S N N S T S D E S E E H Q L S - I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L
 
AT1G13600.1     D E L W S Q V I R L R T D N H C L M D K L N R V S E S H E L A L K E N A K L K E E T S D L R Q L I S E I K S H N E D D N
pt041671_POPTR_    D E L W T Q V V R L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P Y T A
 
AT1G13600.1     S F L R E L E D S I S N S - - - R S D - S N Q S - G R D F E L C -
pt041671_POPTR_    T A L R D L E E V P C N T A H V R A E S S N Q S V T S S V D L L H
 
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