fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003838 not found in 151aa AT3G30530.1 1st_not 0.419354838 II
Gm000832 not found in 198aa AT3G30530.1 not_not 0.407624633 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.407624633 III
Gm022507 not found in 193aa AT3G30530.1 not_not 0.401759530 III
Pt041671 not found in 200aa AT1G13600.1 1st_1st 0.445747800 Ia
Pt033625 not found in 200aa AT1G13600.1 not_1st 0.425219941 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G13600.1     MNTIPAE-LTGYFHYLPPDKYNNQTPI----MESEYFNMPSS---PTSCSSFYHLNGLIN
gm022507_Glyma0 --MQARE-ITG-LNYLLPPD-----PC------FNY-SMVQNTI-PT-----FQLHKLSN
gm003838_Glyma0 --MVPS------------------------------------------------------
gm051143_Glyma1 --MQSREVVSG-LNYLLPSN-----PCPYPPNNNNYTTMFQNNINPT-----FQFQRFSN
pt033625_POPTR_ --MLPGE-LTG-IRYLTADQN--LVPF--P---ANFGMMQQSNI-PS-----FHFNRLLS
pt041671_POPTR_ --MLPGE-LTG-IHYIAPDQS--LIPF--P---ANFGMMQQSSI-PA-----FHFNRLLN
gm000832_Glyma0 --MVPSE-IRG-VHYLAPEN-----PFLVP---PNFSLL-QSDI-PN-----LHLNTLLS
                    .                                                       

AT1G13600.1     N------NNYSSSSNGQDLMT------SNNSTSDE-DHQQSMVIDERKQRRMISNRESAR
gm022507_Glyma0 QFYG---LQKPPPQVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESAR
gm003838_Glyma0 ----------------HEFVVPPSSCLSNNSTSDEADEIQFNIIDERKHRRMISNRESAR
gm051143_Glyma1 QIYGYNNINNTPYHKVPDLFSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESAR
pt033625_POPTR_ NL-----QNSSLPQPVYEF-APQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESAR
pt041671_POPTR_ NL-----QSSSFPQPVREF-TPQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESAR
gm000832_Glyma0 NF-----PNCHFPPSGHEFVVPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESAR
                                 ::        *.****** :. :  :*:***:***********

AT1G13600.1     RSRMRKQRHLDELWSQVIRLRTDNHCLMDKLNRVSESHELALKENAKLKEETSDLRQLIS
gm022507_Glyma0 RSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMIC
gm003838_Glyma0 RSRMRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLA
gm051143_Glyma1 RSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIR
pt033625_POPTR_ RSRMRKQKHLDELWSQVVRLRTENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLT
pt041671_POPTR_ RSRMRKQKHLDELWTQVVRLRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMIT
gm000832_Glyma0 RSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLA
                *******:******:**: **.:** *:***.:***.*: . :**.:*::::  :**:: 

AT1G13600.1     EIKSHNEDDNSFLRELEDSISNS---------RSDS-NQSGRDF------ELC--
gm022507_Glyma0 DMQLHSPYHPPPLSPIDD---DV-----SPYVKSDSS---ITDSL-----DLLG-
gm003838_Glyma0 DMQIGTSFACT-MEDLEDLPCNT-----SQLLKPDPLNESITPA------DMIHE
gm051143_Glyma1 DMQIHSPCPSSFITPLEDHHHDVDHVIPSAYLRSDSSN-QLSNSCNNNMDDLLG-
pt033625_POPTR_ DFQIGSPYTTTALRDLEEVPCNT-----AH-LRAESSNQSITSSV-----DLLH-
pt041671_POPTR_ DLQIGSPYTATALRDLEEVPCNT-----AH-VRAESSNQSVTSSV-----DLLH-
gm000832_Glyma0 DMQIGTAFACT-MEDLEDLPCNT-----SQ-LKPDPLNQSITPA------DMIHE
                :::  .    . :  :::   :          :.:.              ::
BoxShade v3.31 C (beta, 970507) Output
AT1G13600.1     M N T I P A E - L T G Y F H Y L P P D K Y N N Q T P I - - - - M E S E Y F N M P S S - - - P T S C S S F Y H L N G L I N
gm022507_Glyma0    - - M Q A R E - I T G - L N Y L L P P D - - - - - P C - - - - - - F N Y - S M V Q N T I - P T - - - - - F Q L H K L S N
gm003838_Glyma0    - - M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051143_Glyma1    - - M Q S R E V V S G - L N Y L L P S N - - - - - P C P Y P P N N N N Y T T M F Q N N I N P T - - - - - F Q F Q R F S N
pt033625_POPTR_    - - M L P G E - L T G - I R Y L T A D Q N - - L V P F - - P - - - A N F G M M Q Q S N I - P S - - - - - F H F N R L L S
pt041671_POPTR_    - - M L P G E - L T G - I H Y I A P D Q S - - L I P F - - P - - - A N F G M M Q Q S S I - P A - - - - - F H F N R L L N
gm000832_Glyma0    - - M V P S E - I R G - V H Y L A P E N - - - - - P F L V P - - - P N F S L L - Q S D I - P N - - - - - L H L N T L L S
 
AT1G13600.1     N - - - - - - N N Y S S S S N G Q D L M T - - - - - - S N N S T S D E - D H Q Q S M V I D E R K Q R R M I S N R E S A R
gm022507_Glyma0    Q F Y G - - - L Q K P P P Q V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R
gm003838_Glyma0    - - - - - - - - - - - - - - - - H E F V V P P S S C L S N N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R
gm051143_Glyma1    Q I Y G Y N N I N N T P Y H K V P D L F S P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R
pt033625_POPTR_    N L - - - - - Q N S S L P Q P V Y E F - A P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R
pt041671_POPTR_    N L - - - - - Q S S S F P Q P V R E F - T P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R
gm000832_Glyma0    N F - - - - - P N C H F P P S G H E F V V P P S S C L S S N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R
 
AT1G13600.1     R S R M R K Q R H L D E L W S Q V I R L R T D N H C L M D K L N R V S E S H E L A L K E N A K L K E E T S D L R Q L I S
gm022507_Glyma0    R S R M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C
gm003838_Glyma0    R S R M R K Q K H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A
gm051143_Glyma1    R S R M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R
pt033625_POPTR_    R S R M R K Q K H L D E L W S Q V V R L R T E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T
pt041671_POPTR_    R S R M R K Q K H L D E L W T Q V V R L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T
gm000832_Glyma0    R S R M R K Q K H L D E L W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A
 
AT1G13600.1     E I K S H N E D D N S F L R E L E D S I S N S - - - - - - - - - R S D S - N Q S G R D F - - - - - - E L C - -
gm022507_Glyma0    D M Q L H S P Y H P P P L S P I D D - - - D V - - - - - S P Y V K S D S S - - - I T D S L - - - - - D L L G -
gm003838_Glyma0    D M Q I G T S F A C T - M E D L E D L P C N T - - - - - S Q L L K P D P L N E S I T P A - - - - - - D M I H E
gm051143_Glyma1    D M Q I H S P C P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N - Q L S N S C N N N M D D L L G -
pt033625_POPTR_    D F Q I G S P Y T T T A L R D L E E V P C N T - - - - - A H - L R A E S S N Q S I T S S V - - - - - D L L H -
pt041671_POPTR_    D L Q I G S P Y T A T A L R D L E E V P C N T - - - - - A H - V R A E S S N Q S V T S S V - - - - - D L L H -
gm000832_Glyma0    D M Q I G T A F A C T - M E D L E D L P C N T - - - - - S Q - L K P D P L N Q S I T P A - - - - - - D M I H E
 
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