fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G13600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003838 not found in 151aa AT3G30530.1 1st_not 0.419354838 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G13600.1     MNTIPAELTGYFHYLPPDKYNNQTPIMESEYFNMPSSPTSCSSFYHLNGLINNNNYSSSS
gm003838_Glyma0 -------------------------MVPSHEFVVP--PSSC-------------------
                                         :: *. * :*  *:**                   

AT1G13600.1     NGQDLMTSNNSTSDE-DHQQSMVIDERKQRRMISNRESARRSRMRKQRHLDELWSQVIRL
gm003838_Glyma0 ------LSNNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRL
                       ******** *. *  :*****:******************:*********:**

AT1G13600.1     RTDNHCLMDKLNRVSESHELALKENAKLKEETSDLRQLISEIKSHNEDDNSF---LRELE
gm003838_Glyma0 RTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQI----GTSFACTMEDLE
                **:**.*:****:*****: .*:***:****:*****::::::     ..**   :.:**

AT1G13600.1     DSISNS----RSDS-NQSGRDFELC--
gm003838_Glyma0 DLPCNTSQLLKPDPLNESITPADMIHE
                *  .*:    :.*. *:*    ::
BoxShade v3.31 C (beta, 970507) Output
AT1G13600.1     M N T I P A E L T G Y F H Y L P P D K Y N N Q T P I M E S E Y F N M P S S P T S C S S F Y H L N G L I N N N N Y S S S S
gm003838_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - M V P S H E F V V P - - P S S C - - - - - - - - - - - - - - - - - - -
 
AT1G13600.1     N G Q D L M T S N N S T S D E - D H Q Q S M V I D E R K Q R R M I S N R E S A R R S R M R K Q R H L D E L W S Q V I R L
gm003838_Glyma0    - - - - - - L S N N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q K H L D E L W S Q V V R L
 
AT1G13600.1     R T D N H C L M D K L N R V S E S H E L A L K E N A K L K E E T S D L R Q L I S E I K S H N E D D N S F - - - L R E L E
gm003838_Glyma0    R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I - - - - G T S F A C T M E D L E
 
AT1G13600.1     D S I S N S - - - - R S D S - N Q S G R D F E L C - -
gm003838_Glyma0    D L P C N T S Q L L K P D P L N E S I T P A D M I H E
 
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