fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp025345 not found in 253aa AT4G24660.1 1st_not 0.401315789 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14440.1     ME-IASQEDHDMPIPLNTTFGGGGSHGHMIHHHDHHAANSAPPTHNN-NNTTQPPPMPLH
pp025345_Pp1s16 MESLVSYKIDYTPMPITATFAG---------LHEFSKLKLFSNTGNRVTNMDEPRPMEAA
                ** :.* : .  *:*:.:**.*          *:.   :  . * *. .*  :* **   

AT1G14440.1     GNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGED
pp025345_Pp1s16 G---------------------AKAKSKAIRYRECNRNHAISTGGYAVDGCGEFMPGGEE
                *                     *  *.  *:*:** :*** : ** *.********.**:

AT1G14440.1     GSIEALTCSACNCHRNFHRKEVEGELAATAMSPYHQHPPHRKLML--------NHQKIRS
pp025345_Pp1s16 GTVAALKCAACDCHRNFHRKEVEGEATCDCQNIKRNDPRKRGLMAPGGPSQPGSSQQLAL
                *:: **.*:**:************* :. . .  ::.* :* **         . *::  

AT1G14440.1     AMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQK
pp025345_Pp1s16 PTPAQIISRVTAAPFLLGPGPTDSDD---GDGGLSGS------PSTIKKRFRTRFNNEQK
                . * *:*  : .: :    . ::*:*    **  :.*      * . ******:*. ***

AT1G14440.1     EKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIHFSKKNNINLEDNDN
pp025345_Pp1s16 EKMGVFAEKLGWKIQKHDEAAVQEFCAEVGVKRHVLKVWMHNNKHTIGKK----------
                ***  ****:*****::::..**.** *:****:**********  :.**          

AT1G14440.1     EKINNLNNVDLSGNNDMTKIVP-
pp025345_Pp1s16 ---------------------PP
                                     *
BoxShade v3.31 C (beta, 970507) Output
AT1G14440.1     M E - I A S Q E D H D M P I P L N T T F G G G G S H G H M I H H H D H H A A N S A P P T H N N - N N T T Q P P P M P L H
pp025345_Pp1s16    M E S L V S Y K I D Y T P M P I T A T F A G - - - - - - - - - L H E F S K L K L F S N T G N R V T N M D E P R P M E A A
 
AT1G14440.1     G N G H G N N Y D H H H H Q D P H H V G Y N A I I K K P M I K Y K E C L K N H A A A M G G N A T D G C G E F M P S G E D
pp025345_Pp1s16    G - - - - - - - - - - - - - - - - - - - - - A K A K S K A I R Y R E C N R N H A I S T G G Y A V D G C G E F M P G G E E
 
AT1G14440.1     G S I E A L T C S A C N C H R N F H R K E V E G E L A A T A M S P Y H Q H P P H R K L M L - - - - - - - - N H Q K I R S
pp025345_Pp1s16    G T V A A L K C A A C D C H R N F H R K E V E G E A T C D C Q N I K R N D P R K R G L M A P G G P S Q P G S S Q Q L A L
 
AT1G14440.1     A M P H Q M I M P I G V S N Y R Y M H N N S E S E D F M E E D G V T T A S R S L P N L P Y N Q K K R F R T K F T P E Q K
pp025345_Pp1s16    P T P A Q I I S R V T A A P F L L G P G P T D S D D - - - G D G G L S G S - - - - - - P S T I K K R F R T R F N N E Q K
 
AT1G14440.1     E K M L S F A E K V G W K I Q R Q E D C V V Q R F C E E I G V K R R V L K V W M H N N K I H F S K K N N I N L E D N D N
pp025345_Pp1s16    E K M G V F A E K L G W K I Q K H D E A A V Q E F C A E V G V K R H V L K V W M H N N K H T I G K K - - - - - - - - - -
 
AT1G14440.1     E K I N N L N N V D L S G N N D M T K I V P -
pp025345_Pp1s16    - - - - - - - - - - - - - - - - - - - - - P P
 
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