fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020182 not found in 300aa AT1G14440.2 1st_not 0.502192982 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14440.1     ----MEIASQEDHDMPIPLNTTFGG--GGSHGHMIHHHDHHAANSAPPTHNNNNTTQPPP
pt020182_POPTR_ MRKEMELSSHE-AGIPIPLNSTFGGAHGHGHGHLI-HHDHPA---VPHNHNNIISSTAPQ
                    **::*:*  .:*****:****  * .***:* **** *   .* .***  :: .* 

AT1G14440.1     MPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMP
pt020182_POPTR_ IPSSNNGTSITT---ASIDDNHVPY-----KKMVRYRECLKNHAASMGGNATDGCGEFMP
                :*  .** . .       * :** *     * *::*:********:**************

AT1G14440.1     SGEDGSIEALTCSACNCHRNFHRKEVEGE-LAATAMSPYHQHPPH-----RKLMLNHQK-
pt020182_POPTR_ SGEEGSIEALTCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVILGHHKS
                ***:*********************:***  :.*.   **: * *     **::*.*:* 

AT1G14440.1     ------------------IRSAMP-HQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASR
pt020182_POPTR_ ILAPEALGYPTATGTLIPSRASAPHHQMIM-----SYNMGSLPSESDE--QEDGGGVLMA
                                   *:: * *****     .*.     ***::  :***  .   

AT1G14440.1     SLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKV
pt020182_POPTR_ RPAQL---MKKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKV
                  .:*    ********: *******.********:*:**: ***:**:***********

AT1G14440.1     WMHNNKIHFSKKNNINLEDNDNEKINNLNNVDLSGNNDMTKIVP
pt020182_POPTR_ WMHNNKHSLAKKNPSTTTTTSNS---------------------
                ******  ::***  .   ..*.
BoxShade v3.31 C (beta, 970507) Output
AT1G14440.1     - - - - M E I A S Q E D H D M P I P L N T T F G G - - G G S H G H M I H H H D H H A A N S A P P T H N N N N T T Q P P P
pt020182_POPTR_    M R K E M E L S S H E - A G I P I P L N S T F G G A H G H G H G H L I - H H D H P A - - - V P H N H N N I I S S T A P Q
 
AT1G14440.1     M P L H G N G H G N N Y D H H H H Q D P H H V G Y N A I I K K P M I K Y K E C L K N H A A A M G G N A T D G C G E F M P
pt020182_POPTR_    I P S S N N G T S I T T - - - A S I D D N H V P Y - - - - - K K M V R Y R E C L K N H A A S M G G N A T D G C G E F M P
 
AT1G14440.1     S G E D G S I E A L T C S A C N C H R N F H R K E V E G E - L A A T A M S P Y H Q H P P H - - - - - R K L M L N H Q K -
pt020182_POPTR_    S G E E G S I E A L T C S A C N C H R N F H R K E I E G E H T S C T G D H C Y H N S P V H F N R L G R K V I L G H H K S
 
AT1G14440.1     - - - - - - - - - - - - - - - - - - I R S A M P - H Q M I M P I G V S N Y R Y M H N N S E S E D F M E E D G V T T A S R
pt020182_POPTR_    I L A P E A L G Y P T A T G T L I P S R A S A P H H Q M I M - - - - - S Y N M G S L P S E S D E - - Q E D G G G V L M A
 
AT1G14440.1     S L P N L P Y N Q K K R F R T K F T P E Q K E K M L S F A E K V G W K I Q R Q E D C V V Q R F C E E I G V K R R V L K V
pt020182_POPTR_    R P A Q L - - - M K K R F R T K F S Q E Q K E K M L N F A E K V G W K L Q K Q E E T V V Q Q F C Q E I G V K R R V L K V
 
AT1G14440.1     W M H N N K I H F S K K N N I N L E D N D N E K I N N L N N V D L S G N N D M T K I V P
pt020182_POPTR_    W M H N N K H S L A K K N P S T T T T T S N S - - - - - - - - - - - - - - - - - - - - -
 
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