fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011857 not found in 260aa AT1G14440.2 not_not 0.456140350 III
Pt018733 not found in 268aa AT2G02540.1 not_not 0.438596491 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G14440.1     MEIASQEDHDMPIPLNTTFGGGGSHGHMIHHHDHHAANSAPPTHNNNNTTQPPPMPLHGN
pt011857_POPTR_ MELSSREG-EIPIPLN-AFGGG--HGHLI-QYDHAA------THNHIISSTAPQIPS---
pt018733_POPTR_ MDESSLQK-DMPISRNGSYAGG--NGH-----SHTV------T-----SAAAAQVPTI--
                *: :* :  ::**. * ::.**  :**     .* .      *     :: .. :*    

AT1G14440.1     GHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGS
pt011857_POPTR_ -NNGPSITTASIDDNHVPY-----KKMVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGS
pt018733_POPTR_ GHSSPS----SQQEDQRPY-----KKVMRYKECLKNHAAAIGGNATDGCGEFIPGGEEGS
                 :..        : .:  *     * :::*:*********:***********:*.**:**

AT1G14440.1     IEALTCSACNCHRNFHRKEVEGELAATAMSPYHQHPPHR-----KLMLNHQK--------
pt011857_POPTR_ IEALTCSACNCHRNFHRREIEGEHTSCG-DCYHNNPHFNRVGR-KVILGHQTSILAPEAL
pt018733_POPTR_ LEALKCSACNCHRNFHRKEIDGE---CSYDCHHHYPVMSNIGSGRLISGHHNGIIGSPPQ
                :***.************:*::**    . . :*: *        ::: .*:.        

AT1G14440.1     -----------IRSAMP-HQMIMPIGVSNYRYM---HNNSESEDFMEE-DGVTTASRSLP
pt011857_POPTR_ GYPTATGTLVPPRAAAPHHQMIM-----SYNMG---SLPSESDEQED--GGGVVMARPAQ
pt018733_POPTR_ GYPTS--SFISSRAPPP-HQVVV-----SYKNGGANAITSESDEKEEDNGGGILTTRPVE
                            *:. * **:::     .*.        ***::  :  .*    :*.  

AT1G14440.1     NLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMH
pt011857_POPTR_ LM----KKRYRTKFTQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGIKRRVLK----
pt018733_POPTR_ KL----RKRFRTKFTEEQKQKMLNFAEKAGWKMQKLEESVVQGLCQELGIKRRVLKVWMH
                 :    :**:***** ***:***.****.***:*: *: *** :*:*:*:******    

AT1G14440.1     NNKIHFSKKNNINLEDNDNEKINNLNNVDLSGNNDMTKIVP
pt011857_POPTR_ -----------------------------------------
pt018733_POPTR_ NNKHNYVKNSTSS----------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G14440.1     M E I A S Q E D H D M P I P L N T T F G G G G S H G H M I H H H D H H A A N S A P P T H N N N N T T Q P P P M P L H G N
pt011857_POPTR_    M E L S S R E G - E I P I P L N - A F G G G - - H G H L I - Q Y D H A A - - - - - - T H N H I I S S T A P Q I P S - - -
pt018733_POPTR_    M D E S S L Q K - D M P I S R N G S Y A G G - - N G H - - - - - S H T V - - - - - - T - - - - - S A A A A Q V P T I - -
 
AT1G14440.1     G H G N N Y D H H H H Q D P H H V G Y N A I I K K P M I K Y K E C L K N H A A A M G G N A T D G C G E F M P S G E D G S
pt011857_POPTR_    - N N G P S I T T A S I D D N H V P Y - - - - - K K M V R Y R E C L K N H A A A M G G N A T D G C G E F M P S G E E G S
pt018733_POPTR_    G H S S P S - - - - S Q Q E D Q R P Y - - - - - K K V M R Y K E C L K N H A A A I G G N A T D G C G E F I P G G E E G S
 
AT1G14440.1     I E A L T C S A C N C H R N F H R K E V E G E L A A T A M S P Y H Q H P P H R - - - - - K L M L N H Q K - - - - - - - -
pt011857_POPTR_    I E A L T C S A C N C H R N F H R R E I E G E H T S C G - D C Y H N N P H F N R V G R - K V I L G H Q T S I L A P E A L
pt018733_POPTR_    L E A L K C S A C N C H R N F H R K E I D G E - - - C S Y D C H H H Y P V M S N I G S G R L I S G H H N G I I G S P P Q
 
AT1G14440.1     - - - - - - - - - - - I R S A M P - H Q M I M P I G V S N Y R Y M - - - H N N S E S E D F M E E - D G V T T A S R S L P
pt011857_POPTR_    G Y P T A T G T L V P P R A A A P H H Q M I M - - - - - S Y N M G - - - S L P S E S D E Q E D - - G G G V V M A R P A Q
pt018733_POPTR_    G Y P T S - - S F I S S R A P P P - H Q V V V - - - - - S Y K N G G A N A I T S E S D E K E E D N G G G I L T T R P V E
 
AT1G14440.1     N L P Y N Q K K R F R T K F T P E Q K E K M L S F A E K V G W K I Q R Q E D C V V Q R F C E E I G V K R R V L K V W M H
pt011857_POPTR_    L M - - - - K K R Y R T K F T Q E Q K E K M L N F A E K V G W K L Q K Q E E T V V Q Q F C Q E I G I K R R V L K - - - -
pt018733_POPTR_    K L - - - - R K R F R T K F T E E Q K Q K M L N F A E K A G W K M Q K L E E S V V Q G L C Q E L G I K R R V L K V W M H
 
AT1G14440.1     N N K I H F S K K N N I N L E D N D N E K I N N L N N V D L S G N N D M T K I V P
pt011857_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt018733_POPTR_    N N K H N Y V K N S T S S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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