fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019670 not found in 283aa AT1G14440.2 1st_not 0.504385964 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14440.1     MEIASQEDHDMPIPLN--TTFGGGGSHGH--MIHHHDHHAANSAPPTHNNNNTTQPPPMP
gm019670_Glyma0 MELSSQEG-EIPIPINSSTTYGHGNGHGHGLMIHHDHNHIISSTAPSNG------IPTM-
                **::***. ::***:*  **:* *..***  ****..:*  .*:.*::.       *.* 

AT1G14440.1     LHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSG
gm019670_Glyma0 -------------QQEEDHGLGS----YKKVVRYRECLKNHAAAMGGNATDGCGEFMPSG
                             :::: * :*      * :::*:*************************

AT1G14440.1     EDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPYH-------QH--PPHRKLM----L
gm019670_Glyma0 EEGTIEALNCSACHCHRNFHRKEVEGEPSCD----YHHLNINRRRHILGPHKNLLPPEAL
                *:*:****.****:************* :.     **       :*   **::*:    *

AT1G14440.1     NH-QKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDG------VTTASRSLPNLPYN
gm019670_Glyma0 GYPTAARSVPPHQMIMPYNIGGIGH-HLPSESDE--QEDGGGGGGMVQLSSRPISSQQQL
                .:    **. ******* .:..  : *  ***::  :***      *  :**.:..    

AT1G14440.1     QKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIH
gm019670_Glyma0 VKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHN
                 ********: ***:***.**********:**:.***:**:***************** :

AT1G14440.1     FSKKNNINLEDNDNEKINNLNNVDLSGNNDMTKIVP---
gm019670_Glyma0 LAKK------------------------NPPTTAAPPPP
                ::**                        *  *. .*
BoxShade v3.31 C (beta, 970507) Output
AT1G14440.1     M E I A S Q E D H D M P I P L N - - T T F G G G G S H G H - - M I H H H D H H A A N S A P P T H N N N N T T Q P P P M P
gm019670_Glyma0    M E L S S Q E G - E I P I P I N S S T T Y G H G N G H G H G L M I H H D H N H I I S S T A P S N G - - - - - - I P T M -
 
AT1G14440.1     L H G N G H G N N Y D H H H H Q D P H H V G Y N A I I K K P M I K Y K E C L K N H A A A M G G N A T D G C G E F M P S G
gm019670_Glyma0    - - - - - - - - - - - - - Q Q E E D H G L G S - - - - Y K K V V R Y R E C L K N H A A A M G G N A T D G C G E F M P S G
 
AT1G14440.1     E D G S I E A L T C S A C N C H R N F H R K E V E G E L A A T A M S P Y H - - - - - - - Q H - - P P H R K L M - - - - L
gm019670_Glyma0    E E G T I E A L N C S A C H C H R N F H R K E V E G E P S C D - - - - Y H H L N I N R R R H I L G P H K N L L P P E A L
 
AT1G14440.1     N H - Q K I R S A M P H Q M I M P I G V S N Y R Y M H N N S E S E D F M E E D G - - - - - - V T T A S R S L P N L P Y N
gm019670_Glyma0    G Y P T A A R S V P P H Q M I M P Y N I G G I G H - H L P S E S D E - - Q E D G G G G G G M V Q L S S R P I S S Q Q Q L
 
AT1G14440.1     Q K K R F R T K F T P E Q K E K M L S F A E K V G W K I Q R Q E D C V V Q R F C E E I G V K R R V L K V W M H N N K I H
gm019670_Glyma0    V K K R F R T K F S Q E Q K D K M L N F A E K V G W K I Q K Q E E S V V Q Q F C Q E I G V K R R V L K V W M H N N K H N
 
AT1G14440.1     F S K K N N I N L E D N D N E K I N N L N N V D L S G N N D M T K I V P - - -
gm019670_Glyma0    L A K K - - - - - - - - - - - - - - - - - - - - - - - - N P P T T A A P P P P
 
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