fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019670 not found in 283aa AT1G14440.2 1st_not 0.504385964 II
Gm045537 not found in 259aa AT1G14440.2 not_not 0.478070175 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G14440.1     MEIASQEDHDMPIPLN--TTFGGGG----SHGH--MIHH-HDHHAANSAPPTHNNNNTTQ
gm019670_Glyma0 MELSSQEG-EIPIPINSSTTYGHGN----GHGHGLMIHHDHNHIISSTAP----------
gm045537_Glyma1 MELSSQEG-EIPIPINSSTTYGHGNGHGHGHGHGLMIHHDHNHIISSSAP----------
                **::***. ::***:*  **:* *.    .***  **** *:*  :.:**          

AT1G14440.1     PPPMPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGE
gm019670_Glyma0 -------SNGIPT---MQQEEDHGLGSY-----KKVVRYRECLKNHAAAMGGNATDGCGE
gm045537_Glyma1 -------SNGIPTTMQQQEEEEEEEDRY-----KKVVRYRECLKNHAAAMGGNATDGCGE
                       .**  .    :..::     *     * :::*:********************

AT1G14440.1     FMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPYH-------QH--PPHRKLM
gm019670_Glyma0 FMPSGEEGTIEALNCSACHCHRNFHRKEVEGEPSCD----YHHLNINRRRHILGPHKNLL
gm045537_Glyma1 FMPSGKEGSIEALNCSACHCHRNFHRKEVEA-----------------------------
                *****::*:****.****:***********.                             

AT1G14440.1     ----LNHQ-KIRSAMPHQMIMPI---GVSNYRYMHNNSESEDFMEEDG------VTTASR
gm019670_Glyma0 PPEALGYPTAARSVPPHQMIMPYNIGGIGH----HLPSESDE--QEDGGGGGGMVQLSSR
gm045537_Glyma1 ---------AARSVPPHQMIMPYNI-GIGH----HLPSESDE--QEDAAAGAGMVQLSSR
                           **. *******    *:.:    *  ***::  :**.      *  :**

AT1G14440.1     SLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKV
gm019670_Glyma0 PISSQQQLVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKV
gm045537_Glyma1 P--SSAQLVKKRFRTKFSQDQKDKMLNFAEKVGWKIQKQEESVVQHFCQEIGVKRRVLKV
                .  .     ********: :**:***.**********:**:.***:**:***********

AT1G14440.1     WMHNNKIHFSKKNNINLEDNDNEKINNLNNVDLSGNNDMTKIVP--------
gm019670_Glyma0 WMHNNKHNLAKK------------------------NPPTTAAPPPP-----
gm045537_Glyma1 WMHNNKHNLAKK-----------------------INPPTTTAPPPPPPPPP
                ****** :::**                        *  *. .*
BoxShade v3.31 C (beta, 970507) Output
AT1G14440.1     M E I A S Q E D H D M P I P L N - - T T F G G G G - - - - S H G H - - M I H H - H D H H A A N S A P P T H N N N N T T Q
gm019670_Glyma0    M E L S S Q E G - E I P I P I N S S T T Y G H G N - - - - G H G H G L M I H H D H N H I I S S T A P - - - - - - - - - -
gm045537_Glyma1    M E L S S Q E G - E I P I P I N S S T T Y G H G N G H G H G H G H G L M I H H D H N H I I S S S A P - - - - - - - - - -
 
AT1G14440.1     P P P M P L H G N G H G N N Y D H H H H Q D P H H V G Y N A I I K K P M I K Y K E C L K N H A A A M G G N A T D G C G E
gm019670_Glyma0    - - - - - - - S N G I P T - - - M Q Q E E D H G L G S Y - - - - - K K V V R Y R E C L K N H A A A M G G N A T D G C G E
gm045537_Glyma1    - - - - - - - S N G I P T T M Q Q Q E E E E E E E D R Y - - - - - K K V V R Y R E C L K N H A A A M G G N A T D G C G E
 
AT1G14440.1     F M P S G E D G S I E A L T C S A C N C H R N F H R K E V E G E L A A T A M S P Y H - - - - - - - Q H - - P P H R K L M
gm019670_Glyma0    F M P S G E E G T I E A L N C S A C H C H R N F H R K E V E G E P S C D - - - - Y H H L N I N R R R H I L G P H K N L L
gm045537_Glyma1    F M P S G K E G S I E A L N C S A C H C H R N F H R K E V E A - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G14440.1     - - - - L N H Q - K I R S A M P H Q M I M P I - - - G V S N Y R Y M H N N S E S E D F M E E D G - - - - - - V T T A S R
gm019670_Glyma0    P P E A L G Y P T A A R S V P P H Q M I M P Y N I G G I G H - - - - H L P S E S D E - - Q E D G G G G G G M V Q L S S R
gm045537_Glyma1    - - - - - - - - - A A R S V P P H Q M I M P Y N I - G I G H - - - - H L P S E S D E - - Q E D A A A G A G M V Q L S S R
 
AT1G14440.1     S L P N L P Y N Q K K R F R T K F T P E Q K E K M L S F A E K V G W K I Q R Q E D C V V Q R F C E E I G V K R R V L K V
gm019670_Glyma0    P I S S Q Q Q L V K K R F R T K F S Q E Q K D K M L N F A E K V G W K I Q K Q E E S V V Q Q F C Q E I G V K R R V L K V
gm045537_Glyma1    P - - S S A Q L V K K R F R T K F S Q D Q K D K M L N F A E K V G W K I Q K Q E E S V V Q H F C Q E I G V K R R V L K V
 
AT1G14440.1     W M H N N K I H F S K K N N I N L E D N D N E K I N N L N N V D L S G N N D M T K I V P - - - - - - - -
gm019670_Glyma0    W M H N N K H N L A K K - - - - - - - - - - - - - - - - - - - - - - - - N P P T T A A P P P P - - - - -
gm045537_Glyma1    W M H N N K H N L A K K - - - - - - - - - - - - - - - - - - - - - - - I N P P T T T A P P P P P P P P P
 
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