fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp007249 not found in 287aa AT4G17800.1 1st_not 0.401685393 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14490.1     ---METVG--------------------------------------RPRGRPRGSKNKPK
pp007249_Pp1s79 MAGLEDVGARPSGAPSDDEQSGSSGRGRKRGKQPAENQLAILEPGRKPRGRPPGSKNKPK
                   :* **                                      :***** *******

AT1G14490.1     APIFVTID--PPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSP
pp007249_Pp1s79 PPVIITRENGNAMRPHILEVAGGCDVSDSVASFSRRRQRGVCVMGASGTVSNVTLRQPT-
                .*:::* :   .* *:****..* ** :::  *.* :  *.**:..**:*::******: 

AT1G14490.1     AAPGSTITFHGKFDLLSVSATFLP---PLPPTSLSPPVSNFFTVSLAGPQGKVIGGFVAG
pp007249_Pp1s79 -TPGATVTFHGRFEIISLSGAFLPHPSSAPTTGL--------TVSLAGAAGQVLGGSVVG
                 :**:*:****:*:::*:*.:***   . *.*.*        ******. *:*:** *.*

AT1G14490.1     PLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEGQSPPVS--------GGGGES
pp007249_Pp1s79 TLMAAGPVLVIAASFIGPTFERLPLDNDDEGLTMGGGSSSQQPPLAIQAPELNYPAGLQS
                .*:***.* .:*:** .*::.***  ::::  :  * ...*.**::         .* :*

AT1G14490.1     MY----------------VGGSDVI--W----------DPNA--------KAPSPY-
pp007249_Pp1s79 LYSIVTPQNPNLSNQPQQLSTQDVLSQWAGGGGGGHPHHPHAGHAGHVHHQRPPQYS
                :*                :. .**:  *          .*:*        : *. *
BoxShade v3.31 C (beta, 970507) Output
AT1G14490.1     - - - M E T V G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R P R G R P R G S K N K P K
pp007249_Pp1s79    M A G L E D V G A R P S G A P S D D E Q S G S S G R G R K R G K Q P A E N Q L A I L E P G R K P R G R P P G S K N K P K
 
AT1G14490.1     A P I F V T I D - - P P M S P Y I L E V P S G N D V V E A L N R F C R G K A I G F C V L S G S G S V A D V T L R Q P S P
pp007249_Pp1s79    P P V I I T R E N G N A M R P H I L E V A G G C D V S D S V A S F S R R R Q R G V C V M G A S G T V S N V T L R Q P T -
 
AT1G14490.1     A A P G S T I T F H G K F D L L S V S A T F L P - - - P L P P T S L S P P V S N F F T V S L A G P Q G K V I G G F V A G
pp007249_Pp1s79    - T P G A T V T F H G R F E I I S L S G A F L P H P S S A P T T G L - - - - - - - - T V S L A G A A G Q V L G G S V V G
 
AT1G14490.1     P L V A A G T V Y F V A T S F K N P S Y H R L P A T E E E Q R N S A E G E E E G Q S P P V S - - - - - - - - G G G G E S
pp007249_Pp1s79    T L M A A G P V L V I A A S F I G P T F E R L P L D N D D E G L T M G G G S S S Q Q P P L A I Q A P E L N Y P A G L Q S
 
AT1G14490.1     M Y - - - - - - - - - - - - - - - - V G G S D V I - - W - - - - - - - - - - D P N A - - - - - - - - K A P S P Y -
pp007249_Pp1s79    L Y S I V T P Q N P N L S N Q P Q Q L S T Q D V L S Q W A G G G G G G H P H H P H A G H A G H V H H Q R P P Q Y S
 
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