fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038464 not found in 305aa AT5G49700.1 1st_not 0.643258426 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14490.1     ------------------------------------------------------------
pt038464_POPTR_ MKGEYVEHHQSKHENTPNMFSKLHPRHHQHLPFSQQYQFSRESEEEDTRSTGAAATPNLT
                                                                            

AT1G14490.1     ---------------------METVGRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEV
pt038464_POPTR_ PTTQKQKLNEPNSSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITRESEPSMSPYILEV
                                     :*.* ****** *******.*:::*   :*.********

AT1G14490.1     PSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSA
pt038464_POPTR_ PGGNDVVEALSRFCRRKNMGICVLTGSGTVANVTLRQPS-ATPGATITFHGRFDILSISA
                *.********.**** * :*:***:***:**:******* *:**:******:**:**:**

AT1G14490.1     TFLPPLPPTSLSPPVSNFFTVSLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRL
pt038464_POPTR_ TFL----PQTASYPVPNSFTISLAGPQGQIVGGIVAGSLVAAGTVFVVAASFNNPSYHRL
                ***    * : * **.* **:*******:::**:***.*******:.**:**:*******

AT1G14490.1     PATEEEQRNSAEGEEEGQSPPVSG-GGGESMYV-----GG-------------SDVIWDP
pt038464_POPTR_ PLEEEGRTSGSDGGGEGQSPAVSGAGGGESGHAASGGGGGESCGIAMYSCHMPNDVIWAP
                *  ** : ..::*  *****.*** ***** :.     **             .**** *

AT1G14490.1     NAK--APSPY
pt038464_POPTR_ AARPPPPPPY
                 *:  .*.**
BoxShade v3.31 C (beta, 970507) Output
AT1G14490.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038464_POPTR_    M K G E Y V E H H Q S K H E N T P N M F S K L H P R H H Q H L P F S Q Q Y Q F S R E S E E E D T R S T G A A A T P N L T
 
AT1G14490.1     - - - - - - - - - - - - - - - - - - - - - M E T V G R P R G R P R G S K N K P K A P I F V T - - I D P P M S P Y I L E V
pt038464_POPTR_    P T T Q K Q K L N E P N S S G G T D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R E S E P S M S P Y I L E V
 
AT1G14490.1     P S G N D V V E A L N R F C R G K A I G F C V L S G S G S V A D V T L R Q P S P A A P G S T I T F H G K F D L L S V S A
pt038464_POPTR_    P G G N D V V E A L S R F C R R K N M G I C V L T G S G T V A N V T L R Q P S - A T P G A T I T F H G R F D I L S I S A
 
AT1G14490.1     T F L P P L P P T S L S P P V S N F F T V S L A G P Q G K V I G G F V A G P L V A A G T V Y F V A T S F K N P S Y H R L
pt038464_POPTR_    T F L - - - - P Q T A S Y P V P N S F T I S L A G P Q G Q I V G G I V A G S L V A A G T V F V V A A S F N N P S Y H R L
 
AT1G14490.1     P A T E E E Q R N S A E G E E E G Q S P P V S G - G G G E S M Y V - - - - - G G - - - - - - - - - - - - - S D V I W D P
pt038464_POPTR_    P L E E E G R T S G S D G G G E G Q S P A V S G A G G G E S G H A A S G G G G G E S C G I A M Y S C H M P N D V I W A P
 
AT1G14490.1     N A K - - A P S P Y
pt038464_POPTR_    A A R P P P P P P Y
 
0