fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004670 not found in 271aa AT5G49700.1 1st_not 0.584269662 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14490.1     --------------------------------------------------------METV
gm004670_Glyma0 MFSKLQPQHQQQHQPFQFSRECQTSEDDDSRSSGGPNTAVAQKSVLGGGGCSDGATIEVV
                                                                        :*.*

AT1G14490.1     GRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLS
gm004670_Glyma0 RRPRGRPPGSKNRPKPPLIITREPEPAMSPFILEIPGGSDVVEALARFSRRKNTGLCVLT
                 ****** ****:**.*:::*   :*.***:***:*.*.****** **.* *  *:***:

AT1G14490.1     GSGSVADVTLRQP--SPA-APGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTVS
gm004670_Glyma0 GSGTVANVTLRQPSFSPAGATVATVTFHGRFDILSMSATFLHHASPAA----IPNAFAVS
                ***:**:******  *** *. :*:****:**:**:*****   .*::    :.* *:**

AT1G14490.1     LAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEGQSPPV
gm004670_Glyma0 LSGPQGQIVGGFVAGRLLAAGTVFVIAASFNNPSYHRLSSEEEAQNNSGGGAGDAQSPPV
                *:****:::****** *:*****:.:*:**:*******.: ** *.**. *  :.*****

AT1G14490.1     SGGGGESMYVGG----------SDVIWDPNAKAPSPY
gm004670_Glyma0 SGGGLESGHVPAESFMYSCHLPSDVIWAPTPRPPF--
                **** ** :* .          ***** *..:.*
BoxShade v3.31 C (beta, 970507) Output
AT1G14490.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E T V
gm004670_Glyma0    M F S K L Q P Q H Q Q Q H Q P F Q F S R E C Q T S E D D D S R S S G G P N T A V A Q K S V L G G G G C S D G A T I E V V
 
AT1G14490.1     G R P R G R P R G S K N K P K A P I F V T - - I D P P M S P Y I L E V P S G N D V V E A L N R F C R G K A I G F C V L S
gm004670_Glyma0    R R P R G R P P G S K N R P K P P L I I T R E P E P A M S P F I L E I P G G S D V V E A L A R F S R R K N T G L C V L T
 
AT1G14490.1     G S G S V A D V T L R Q P - - S P A - A P G S T I T F H G K F D L L S V S A T F L P P L P P T S L S P P V S N F F T V S
gm004670_Glyma0    G S G T V A N V T L R Q P S F S P A G A T V A T V T F H G R F D I L S M S A T F L H H A S P A A - - - - I P N A F A V S
 
AT1G14490.1     L A G P Q G K V I G G F V A G P L V A A G T V Y F V A T S F K N P S Y H R L P A T E E E Q R N S A E G E E E G Q S P P V
gm004670_Glyma0    L S G P Q G Q I V G G F V A G R L L A A G T V F V I A A S F N N P S Y H R L S S E E E A Q N N S G G G A G D A Q S P P V
 
AT1G14490.1     S G G G G E S M Y V G G - - - - - - - - - - S D V I W D P N A K A P S P Y
gm004670_Glyma0    S G G G L E S G H V P A E S F M Y S C H L P S D V I W A P T P R P P F - -
 
0