fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14600.1 HEEEEELSLSLSLNHP at 191/255 in AT1G14600.1
ASSKIDLNLNLSFSLL at 242/255 in AT1G14600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018473 PLEKCSLSLSLGPDPK in 247/306 AT1G14600.1 1st_1st 0.284974093 Ib
Gm054299 AEVEDELSLSLTLPNP in 244/303 AT1G14600.1 1st_1st 0.316062176 Ib
LKERINLDLSLALCGN in 293/303
Pt035066 EPVDCELSLALSLPQP in 126/185 AT1G14600.1 1st_1st 0.313471502 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G14600.1     MGR----CGRSNDGVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLK
Os018473_Os04t0 MGSGGGGCGRN-----GAVRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQ
pt035066_POPTR_ MGS----CGRS-----GAVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQ
gm054299_Glyma2 MGS----CGRE-----GSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQ
                **     ***.     *.** *:** ******* *** .**:*:: ***: ******:*:

AT1G14600.1     IMDVKGLTISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDH----LHDNLS
Os018473_Os04t0 LMGVKGLTISHVKSHLQMYRCSRLGSHG-TGRRS------EMQPQLQRKHSCG-ADE--Q
pt035066_POPTR_ MMDVKGLTISHVKSHLQMYRSMRSGDLGRLGIQS--------------------------
gm054299_Glyma2 LMDVKGLTISHVKSHLQMYRSMR-GDLGRQGRTSS-----QHRNQSFEEHDDGCVDEGND
                :*.*****************  *    *     *                          

AT1G14600.1     VHARNDC--LLGFHSFNF------------REQTSATDNDD-------------------
Os018473_Os04t0 VPREFLC-----------------PPLKRTRMGTEATY-KGMQGSQGISEMRTTGTQYCI
pt035066_POPTR_ ----------------------------------------------------------CF
gm054299_Glyma2 VGVEYSCSKPMGRESDSFFGHSNLPP-KRARIETRSSISESLQCSQRLCD--AVQNPYCF
                                                                            

AT1G14600.1     DDFLNI---MNMERT---------------------------------------------
Os018473_Os04t0 DDYMQA---MAMERRIKEEGLRWQRDAAAAAAADGGAAASNLQTVGCSVQESDPFKIIKP
pt035066_POPTR_ V------------------------------------------------------SSLF-
gm054299_Glyma2 YDYLQQKKPMADEHK---EFSTW--------------------------QQAQPHSLLFP
                                                                            

AT1G14600.1     ---KTFAGNGE--------SIKF-QSHHSLEAENTKNIWKNTWRENEHEEEE------EL
Os018473_Os04t0 EV-HHL---GP--------VLKL----QCSKVENSGFISSSTGTAARDQPEPPPLEKCSL
pt035066_POPTR_ -------------------IAKL-EGRKC-KPEKL-FTPEVTGSGRAEDEEPV---DCEL
gm054299_Glyma2 EFPNHTSFNSPNQQSDFLQVTKLNEGKSTSQPSNV-LVNTTTETAIAEVED-------EL
                                     *:       : .:       *     .  :       .*

AT1G14600.1     SLSLSLNHPHNHQQRWKSNASSSLSETSEAVSSSSG-PFIFRDCFASS----KIDLNLNL
Os018473_Os04t0 SLSLG-PDPKCMPA-----IASSPSESSCILSSSS---RSFSDCSGNSGCLVAPGVNLEL
pt035066_POPTR_ SLALSLPQPSSHRS-----DSSSTSEISEAFSSYS--RSNFKDCSGFSTG--KRDINLDL
gm054299_Glyma2 SLSLTLPNPSPQ---------SSGSEISEAISSCPGFGNNYKDCSSSSTHTLKERINLDL
                **:*   .*            ** ** *  .** .     : ** . *       :**:*

AT1G14600.1     SFSLLHS
Os018473_Os04t0 SMSICGS
pt035066_POPTR_ SIALCGA
gm054299_Glyma2 SLALCGN
                *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G14600.1     M G R - - - - C G R S N D G V I G G V R P Y V R S P V P R L R W T P E L H R S F V H A V D L L G G Q Y K A T P K L V L K
Os018473_Os04t0    M G S G G G G C G R N - - - - - G A V R Q Y I R S K V P R L R W T G E L H C S F V Q A I E F L G G Q D K A T P K L I L Q
pt035066_POPTR_    M G S - - - - C G R S - - - - - G A V R Q Y V R S K V P R L R W T P E L H H C F V H A I E R L G G Q D K A T P K L V L Q
gm054299_Glyma2    M G S - - - - C G R E - - - - - G S V R Q Y V R S K V P R L R W T P E L H R C F V H A I D S L G G H H K A T P K L V L Q
 
AT1G14600.1     I M D V K G L T I S H V K S H L Q M Y R G S R I T L L G K P E E S S S P S S R R R R R Q D N E E D H - - - - L H D N L S
Os018473_Os04t0    L M G V K G L T I S H V K S H L Q M Y R C S R L G S H G - T G R R S - - - - - - E M Q P Q L Q R K H S C G - A D E - - Q
pt035066_POPTR_    M M D V K G L T I S H V K S H L Q M Y R S M R S G D L G R L G I Q S - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054299_Glyma2    L M D V K G L T I S H V K S H L Q M Y R S M R - G D L G R Q G R T S S - - - - - Q H R N Q S F E E H D D G C V D E G N D
 
AT1G14600.1     V H A R N D C - - L L G F H S F N F - - - - - - - - - - - - R E Q T S A T D N D D - - - - - - - - - - - - - - - - - - -
Os018473_Os04t0    V P R E F L C - - - - - - - - - - - - - - - - - P P L K R T R M G T E A T Y - K G M Q G S Q G I S E M R T T G T Q Y C I
pt035066_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C F
gm054299_Glyma2    V G V E Y S C S K P M G R E S D S F F G H S N L P P - K R A R I E T R S S I S E S L Q C S Q R L C D - - A V Q N P Y C F
 
AT1G14600.1     D D F L N I - - - M N M E R T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os018473_Os04t0    D D Y M Q A - - - M A M E R R I K E E G L R W Q R D A A A A A A A D G G A A A S N L Q T V G C S V Q E S D P F K I I K P
pt035066_POPTR_    V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S L F -
gm054299_Glyma2    Y D Y L Q Q K K P M A D E H K - - - E F S T W - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q A Q P H S L L F P
 
AT1G14600.1     - - - K T F A G N G E - - - - - - - - S I K F - Q S H H S L E A E N T K N I W K N T W R E N E H E E E E - - - - - - E L
Os018473_Os04t0    E V - H H L - - - G P - - - - - - - - V L K L - - - - Q C S K V E N S G F I S S S T G T A A R D Q P E P P P L E K C S L
pt035066_POPTR_    - - - - - - - - - - - - - - - - - - - I A K L - E G R K C - K P E K L - F T P E V T G S G R A E D E E P V - - - D C E L
gm054299_Glyma2    E F P N H T S F N S P N Q Q S D F L Q V T K L N E G K S T S Q P S N V - L V N T T T E T A I A E V E D - - - - - - - E L
 
AT1G14600.1     S L S L S L N H P H N H Q Q R W K S N A S S S L S E T S E A V S S S S G - P F I F R D C F A S S - - - - K I D L N L N L
Os018473_Os04t0    S L S L G - P D P K C M P A - - - - - I A S S P S E S S C I L S S S S - - - R S F S D C S G N S G C L V A P G V N L E L
pt035066_POPTR_    S L A L S L P Q P S S H R S - - - - - D S S S T S E I S E A F S S Y S - - R S N F K D C S G F S T G - - K R D I N L D L
gm054299_Glyma2    S L S L T L P N P S P Q - - - - - - - - - S S G S E I S E A I S S C P G F G N N Y K D C S S S S T H T L K E R I N L D L
 
AT1G14600.1     S F S L L H S
Os018473_Os04t0    S M S I C G S
pt035066_POPTR_    S I A L C G A
gm054299_Glyma2    S L A L C G N
 
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