fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14600.1 HEEEEELSLSLSLNHP at 191/255 in AT1G14600.1
ASSKIDLNLNLSFSLL at 242/255 in AT1G14600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035066 EPVDCELSLALSLPQP in 126/185 AT1G14600.1 1st_1st 0.313471502 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14600.1     MGRCGRSNDGVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDV
pt035066_POPTR_ MGSCGRS-----GAVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQMMDV
                ** ****     *.** **** ***********:.****:: **** ********::***

AT1G14600.1     KGLTISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCL
pt035066_POPTR_ KGLTISHVKSHLQMYRSMRSGDLGR-----------------------------------
                ****************. *   **:                                   

AT1G14600.1     LGFHSFNFREQTSATDNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKNIWKN
pt035066_POPTR_ ----------------------LGIQSCFVSSLFIAKLEGRKCKPEKLFTPEVTGS----
                                      *.* .   :. * .: *. * :..: : .* * .    

AT1G14600.1     TWRENEHEEEE----ELSLSLSLNHPHNHQQRWKSNASSSLSETSEAVSSSSGPFIFRDC
pt035066_POPTR_ ----GRAEDEEPVDCELSLALSLPQPSSHR-----SDSSSTSEISEAFSSYSRSN-FKDC
                    .. *:**    ****:*** :* .*:     . *** ** ***.** * .  *:**

AT1G14600.1     --FASSKIDLNLNLSFSLLHS
pt035066_POPTR_ SGFSTGKRDINLDLSIALCGA
                  *::.* *:**:**::*  :
BoxShade v3.31 C (beta, 970507) Output
AT1G14600.1     M G R C G R S N D G V I G G V R P Y V R S P V P R L R W T P E L H R S F V H A V D L L G G Q Y K A T P K L V L K I M D V
pt035066_POPTR_    M G S C G R S - - - - - G A V R Q Y V R S K V P R L R W T P E L H H C F V H A I E R L G G Q D K A T P K L V L Q M M D V
 
AT1G14600.1     K G L T I S H V K S H L Q M Y R G S R I T L L G K P E E S S S P S S R R R R R Q D N E E D H L H D N L S V H A R N D C L
pt035066_POPTR_    K G L T I S H V K S H L Q M Y R S M R S G D L G R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G14600.1     L G F H S F N F R E Q T S A T D N D D D D F L N I M N M E R T K T F A G N G E S I K F Q S H H S L E A E N T K N I W K N
pt035066_POPTR_    - - - - - - - - - - - - - - - - - - - - - - L G I Q S C F V S S L F I A K L E G R K C K P E K L F T P E V T G S - - - -
 
AT1G14600.1     T W R E N E H E E E E - - - - E L S L S L S L N H P H N H Q Q R W K S N A S S S L S E T S E A V S S S S G P F I F R D C
pt035066_POPTR_    - - - - G R A E D E E P V D C E L S L A L S L P Q P S S H R - - - - - S D S S S T S E I S E A F S S Y S R S N - F K D C
 
AT1G14600.1     - - F A S S K I D L N L N L S F S L L H S
pt035066_POPTR_    S G F S T G K R D I N L D L S I A L C G A
 
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