fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14600.1 HEEEEELSLSLSLNHP at 191/255 in AT1G14600.1
ASSKIDLNLNLSFSLL at 242/255 in AT1G14600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054299 AEVEDELSLSLTLPNP in 244/303 AT1G14600.1 1st_1st 0.316062176 Ib
LKERINLDLSLALCGN in 293/303
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G14600.1     MGRCGRSNDGVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDV
gm054299_Glyma2 MGSCGRE-----GSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDV
                ** ***.     *.** **** ************.****:* ***::********::***

AT1G14600.1     KGLTISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCL
gm054299_Glyma2 KGLTISHVKSHLQMYRSMRGD-LGRQGRTSS----QHRNQSFEE---HDDGCVDEGNDVG
                ****************. *   **:  .:**    ::*.*. **   **: .*.  **  

AT1G14600.1     LGFHSFNFREQTSATDNDDDDFLNIMNM----ERTKTFAGNGESIK--------------
gm054299_Glyma2 VEYSC------SKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVQNPYC
                : : .      :.. ..:.*.*:.  *:     * :* :. .**::              

AT1G14600.1     ---------------------------------FQSHHSLEAENTK--------------
gm054299_Glyma2 FYDYLQQKKPMADEHKEFSTWQQAQPHSLLFPEFPNHTSFNSPNQQSDFLQVTKLNEGKS
                                                 * .* *::: * :              

AT1G14600.1     -----NIWKNTWRENE-HEEEEELSLSLSLNHPHNHQQRWKSNASSSLSETSEAVSSSSG
gm054299_Glyma2 TSQPSNVLVNTTTETAIAEVEDELSLSLTLPNP---------SPQSSGSEISEAISSCPG
                     *:  **  *.   * *:******:* :*         ...** ** ***:**..*

AT1G14600.1     PF--IFRDCFASS----KIDLNLNLSFSLLHS
gm054299_Glyma2 -FGNNYKDCSSSSTHTLKERINLDLSLALCGN
                 *   ::** :**    *  :**:**::*  .
BoxShade v3.31 C (beta, 970507) Output
AT1G14600.1     M G R C G R S N D G V I G G V R P Y V R S P V P R L R W T P E L H R S F V H A V D L L G G Q Y K A T P K L V L K I M D V
gm054299_Glyma2    M G S C G R E - - - - - G S V R Q Y V R S K V P R L R W T P E L H R C F V H A I D S L G G H H K A T P K L V L Q L M D V
 
AT1G14600.1     K G L T I S H V K S H L Q M Y R G S R I T L L G K P E E S S S P S S R R R R R Q D N E E D H L H D N L S V H A R N D C L
gm054299_Glyma2    K G L T I S H V K S H L Q M Y R S M R G D - L G R Q G R T S S - - - - Q H R N Q S F E E - - - H D D G C V D E G N D V G
 
AT1G14600.1     L G F H S F N F R E Q T S A T D N D D D D F L N I M N M - - - - E R T K T F A G N G E S I K - - - - - - - - - - - - - -
gm054299_Glyma2    V E Y S C - - - - - - S K P M G R E S D S F F G H S N L P P K R A R I E T R S S I S E S L Q C S Q R L C D A V Q N P Y C
 
AT1G14600.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F Q S H H S L E A E N T K - - - - - - - - - - - - - -
gm054299_Glyma2    F Y D Y L Q Q K K P M A D E H K E F S T W Q Q A Q P H S L L F P E F P N H T S F N S P N Q Q S D F L Q V T K L N E G K S
 
AT1G14600.1     - - - - - N I W K N T W R E N E - H E E E E E L S L S L S L N H P H N H Q Q R W K S N A S S S L S E T S E A V S S S S G
gm054299_Glyma2    T S Q P S N V L V N T T T E T A I A E V E D E L S L S L T L P N P - - - - - - - - - S P Q S S G S E I S E A I S S C P G
 
AT1G14600.1     P F - - I F R D C F A S S - - - - K I D L N L N L S F S L L H S
gm054299_Glyma2    - F G N N Y K D C S S S S T H T L K E R I N L D L S L A L C G N
 
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