Input
| Putative repression domain
|
|
AT1G15050.1 |
FGGVIDLGLSLRTIQH at 61/185 in AT1G15050.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm054444 |
DDGIIDLGLSLGTVRH in 30/190 |
AT2G01200.2 |
1st_not |
0.404580152 |
II |
HGGYSSLALQLEDMFG in 118/190 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G15050.1 MYCSDPPHPLHLVASDKQQKDHKLILSWKKPTMDSDPLGVFPNSPKYHPYYSQTTEFGGV
gm054444_Glyma2 --------------------------------MESNTSRFLLNSSTLHSVFYQEKQDDGI
*:*:. .: **.. *. : * .: .*:
AT1G15050.1 IDLGLSLRTIQHEIYHSSGQRY------------------------------------CS
gm054444_Glyma2 IDLGLSLGTVRHEAYHSSANLYDEELMDWPHSNLNLKNSRTMHSRSVHQNFDEEIEGVQS
******* *::** ****.: * *
AT1G15050.1 NEGYRRKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEF
gm054444_Glyma2 NE----RWAYVKVNMDGVTIGRKICVLDHGGYSSLALQLEDMFGSQSVSGLRLFQSGSEY
** :*.****.***:.:***:******.**:** ******* ********** **:
AT1G15050.1 CLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDAVLPF-----
gm054444_Glyma2 SLFYKDRQDNWRPVGDVPWKEFIECVKRLRIARKNSGIVSYSSRCT
.*.*:*.:. ** .*****:****.*:****:*:*..::.:
BoxShade v3.31 C (beta, 970507) Output
AT1G15050.1 |
M |
Y |
C |
S |
D |
P |
P |
H |
P |
L |
H |
L |
V |
A |
S |
D |
K |
Q |
Q |
K |
D |
H |
K |
L |
I |
L |
S |
W |
K |
K |
P |
T |
M |
D |
S |
D |
P |
L |
G |
V |
F |
P |
N |
S |
P |
K |
Y |
H |
P |
Y |
Y |
S |
Q |
T |
T |
E |
F |
G |
G |
V |
gm054444_Glyma2 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
S |
N |
T |
S |
R |
F |
L |
L |
N |
S |
S |
T |
L |
H |
S |
V |
F |
Y |
Q |
E |
K |
Q |
D |
D |
G |
I |
|
AT1G15050.1 |
I |
D |
L |
G |
L |
S |
L |
R |
T |
I |
Q |
H |
E |
I |
Y |
H |
S |
S |
G |
Q |
R |
Y |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
S |
gm054444_Glyma2 |
I |
D |
L |
G |
L |
S |
L |
G |
T |
V |
R |
H |
E |
A |
Y |
H |
S |
S |
A |
N |
L |
Y |
D |
E |
E |
L |
M |
D |
W |
P |
H |
S |
N |
L |
N |
L |
K |
N |
S |
R |
T |
M |
H |
S |
R |
S |
V |
H |
Q |
N |
F |
D |
E |
E |
I |
E |
G |
V |
Q |
S |
|
AT1G15050.1 |
N |
E |
G |
Y |
R |
R |
K |
W |
G |
Y |
V |
K |
V |
T |
M |
D |
G |
L |
V |
V |
G |
R |
K |
V |
C |
V |
L |
D |
H |
G |
S |
Y |
S |
T |
L |
A |
H |
Q |
L |
E |
D |
M |
F |
G |
M |
Q |
S |
V |
S |
G |
L |
R |
L |
F |
Q |
M |
E |
S |
E |
F |
gm054444_Glyma2 |
N |
E |
- |
- |
- |
- |
R |
W |
A |
Y |
V |
K |
V |
N |
M |
D |
G |
V |
T |
I |
G |
R |
K |
I |
C |
V |
L |
D |
H |
G |
G |
Y |
S |
S |
L |
A |
L |
Q |
L |
E |
D |
M |
F |
G |
S |
Q |
S |
V |
S |
G |
L |
R |
L |
F |
Q |
S |
G |
S |
E |
Y |
|
AT1G15050.1 |
C |
L |
V |
Y |
R |
D |
E |
E |
G |
L |
W |
R |
N |
A |
G |
D |
V |
P |
W |
N |
E |
F |
I |
E |
S |
V |
E |
R |
L |
R |
I |
T |
R |
R |
N |
D |
A |
V |
L |
P |
F |
- |
- |
- |
- |
- |
gm054444_Glyma2 |
S |
L |
F |
Y |
K |
D |
R |
Q |
D |
N |
W |
R |
P |
V |
G |
D |
V |
P |
W |
K |
E |
F |
I |
E |
C |
V |
K |
R |
L |
R |
I |
A |
R |
K |
N |
S |
G |
I |
V |
S |
Y |
S |
S |
R |
C |
T |
|
|